Protein–RNA interactions for Protein: A0A0U1RPT6

4930433I11Rik, RIKEN cDNA 4930433I11 gene, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930433I11RikA0A0U1RPT6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
4930433I11RikA0A0U1RPT6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.4■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
4930433I11RikA0A0U1RPT6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.39■□□□□ 0.85
4930433I11RikA0A0U1RPT6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.37■□□□□ 0.85
4930433I11RikA0A0U1RPT6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.37■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4930433I11RikA0A0U1RPT6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.36■□□□□ 0.85
4930433I11RikA0A0U1RPT6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.35■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.34■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
4930433I11RikA0A0U1RPT6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.33■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.31■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.29■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
4930433I11RikA0A0U1RPT6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4930433I11RikA0A0U1RPT6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
4930433I11RikA0A0U1RPT6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
4930433I11RikA0A0U1RPT6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.2■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
4930433I11RikA0A0U1RPT6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms