Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv20A0A0B4J1H5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv20A0A0B4J1H5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trbv20A0A0B4J1H5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv20A0A0B4J1H5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trbv20A0A0B4J1H5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trbv20A0A0B4J1H5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv20A0A0B4J1H5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv20A0A0B4J1H5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv20A0A0B4J1H5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv20A0A0B4J1H5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv20A0A0B4J1H5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv20A0A0B4J1H5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv20A0A0B4J1H5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.78■□□□□ 0.92
Trbv20A0A0B4J1H5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv20A0A0B4J1H5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.77■□□□□ 0.92
Trbv20A0A0B4J1H5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv20A0A0B4J1H5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trbv20A0A0B4J1H5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv20A0A0B4J1H5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv20A0A0B4J1H5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trbv20A0A0B4J1H5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Trbv20A0A0B4J1H5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv20A0A0B4J1H5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv20A0A0B4J1H5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trbv20A0A0B4J1H5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv20A0A0B4J1H5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv20A0A0B4J1H5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv20A0A0B4J1H5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trbv20A0A0B4J1H5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv20A0A0B4J1H5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv20A0A0B4J1H5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv20A0A0B4J1H5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv20A0A0B4J1H5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv20A0A0B4J1H5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv20A0A0B4J1H5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trbv20A0A0B4J1H5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv20A0A0B4J1H5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv20A0A0B4J1H5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Gm8109-201ENSMUST00000194076 746 ntBASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv20A0A0B4J1H5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbv20A0A0B4J1H5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms