Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gm28897A0A087WP44 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gm28897A0A087WP44 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28897A0A087WP44 Gm24804-201ENSMUST00000174982 85 ntBASIC20.44■□□□□ 0.86
Gm28897A0A087WP44 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28897A0A087WP44 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gm28897A0A087WP44 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28897A0A087WP44 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28897A0A087WP44 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28897A0A087WP44 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28897A0A087WP44 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Gm28897A0A087WP44 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28897A0A087WP44 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28897A0A087WP44 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28897A0A087WP44 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28897A0A087WP44 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28897A0A087WP44 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28897A0A087WP44 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28897A0A087WP44 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28897A0A087WP44 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Gm28897A0A087WP44 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28897A0A087WP44 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm28897A0A087WP44 Gm16148-201ENSMUST00000119653 893 ntBASIC20.39■□□□□ 0.85
Gm28897A0A087WP44 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28897A0A087WP44 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28897A0A087WP44 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28897A0A087WP44 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28897A0A087WP44 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm28897A0A087WP44 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gm28897A0A087WP44 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm28897A0A087WP44 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28897A0A087WP44 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm28897A0A087WP44 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Gm28897A0A087WP44 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28897A0A087WP44 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28897A0A087WP44 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm28897A0A087WP44 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Gm28897A0A087WP44 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28897A0A087WP44 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28897A0A087WP44 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28897A0A087WP44 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm28897A0A087WP44 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28897A0A087WP44 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28897A0A087WP44 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28897A0A087WP44 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28897A0A087WP44 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28897A0A087WP44 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.3■□□□□ 0.84
Gm28897A0A087WP44 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28897A0A087WP44 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28897A0A087WP44 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28897A0A087WP44 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28897A0A087WP44 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm28897A0A087WP44 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28897A0A087WP44 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28897A0A087WP44 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm28897A0A087WP44 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm28897A0A087WP44 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28897A0A087WP44 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm28897A0A087WP44 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm28897A0A087WP44 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28897A0A087WP44 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Gm28897A0A087WP44 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm28897A0A087WP44 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm28897A0A087WP44 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm28897A0A087WP44 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms