Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KLF4O43474 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.51□□□□□ -1.69
KLF4O43474 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KLF4O43474 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KLF4O43474 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.5□□□□□ -1.69
KLF4O43474 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KLF4O43474 OR56B2P-202ENST00000641377 2453 ntBASIC4.5□□□□□ -1.69
KLF4O43474 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KLF4O43474 AC090740.1-201ENST00000623193 2262 ntBASIC4.5□□□□□ -1.69
KLF4O43474 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.5□□□□□ -1.69
KLF4O43474 RNU6-562P-201ENST00000362731 107 ntBASIC4.5□□□□□ -1.69
KLF4O43474 RNU6-266P-201ENST00000364225 107 ntBASIC4.5□□□□□ -1.69
KLF4O43474 Y_RNA.315-201ENST00000365117 102 ntBASIC4.5□□□□□ -1.69
KLF4O43474 SNORA70.10-201ENST00000384515 134 ntBASIC4.5□□□□□ -1.69
KLF4O43474 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KLF4O43474 AL360182.1-201ENST00000397433 468 ntBASIC4.5□□□□□ -1.69
KLF4O43474 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 AL356057.2-201ENST00000403318 432 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
KLF4O43474 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 DDX39BP1-205ENST00000422507 192 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.5□□□□□ -1.69
KLF4O43474 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 RPS6P12-201ENST00000432491 726 ntBASIC4.5□□□□□ -1.69
KLF4O43474 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.5□□□□□ -1.69
KLF4O43474 snoU13.20-201ENST00000459180 104 ntBASIC4.5□□□□□ -1.69
KLF4O43474 Y_RNA.632-201ENST00000459189 102 ntBASIC4.5□□□□□ -1.69
KLF4O43474 RPS3AP41-201ENST00000462701 778 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.5□□□□□ -1.69
KLF4O43474 RPL7P43-201ENST00000478876 753 ntBASIC4.5□□□□□ -1.69
KLF4O43474 RPS27P27-201ENST00000498779 255 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.5□□□□□ -1.69
KLF4O43474 RNU6-559P-201ENST00000516151 98 ntBASIC4.5□□□□□ -1.69
KLF4O43474 RN7SKP289-201ENST00000517244 295 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.5□□□□□ -1.69
KLF4O43474 AP003122.3-201ENST00000526316 255 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC084851.1-201ENST00000529105 249 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AL442663.2-201ENST00000554385 511 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC087783.2-201ENST00000605070 562 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC245389.1-201ENST00000605141 529 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.5□□□□□ -1.69
KLF4O43474 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
KLF4O43474 MIR6748-201ENST00000610433 71 ntBASIC4.5□□□□□ -1.69
KLF4O43474 AC126177.8-201ENST00000618339 1015 ntBASIC4.5□□□□□ -1.69
KLF4O43474 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.5□□□□□ -1.69
KLF4O43474 AC008013.2-202ENST00000637965 364 ntBASIC4.5□□□□□ -1.69
KLF4O43474 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
KLF4O43474 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KLF4O43474 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.5□□□□□ -1.69
KLF4O43474 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.5□□□□□ -1.69
KLF4O43474 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
KLF4O43474 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.49□□□□□ -1.69
KLF4O43474 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KLF4O43474 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 MIR412-201ENST00000362142 91 ntBASIC4.49□□□□□ -1.69
KLF4O43474 SNORA66-201ENST00000384792 133 ntBASIC4.49□□□□□ -1.69
KLF4O43474 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
KLF4O43474 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KLF4O43474 RNU2-68P-201ENST00000410878 191 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.49□□□□□ -1.69
KLF4O43474 AL353621.1-201ENST00000418219 243 ntBASIC4.49□□□□□ -1.69
KLF4O43474 TMEM167AP1-201ENST00000423409 219 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KLF4O43474 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 AL360271.2-201ENST00000447710 161 ntBASIC4.49□□□□□ -1.69
KLF4O43474 CYCSP34-201ENST00000458172 304 ntBASIC4.49□□□□□ -1.69
KLF4O43474 RNU7-138P-201ENST00000459479 64 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.49□□□□□ -1.69
KLF4O43474 AC026801.1-201ENST00000497178 464 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 AC009901.1-201ENST00000506703 541 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AC008526.1-201ENST00000509149 338 ntBASIC4.49□□□□□ -1.69
KLF4O43474 MTND3P25-201ENST00000509243 135 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.49□□□□□ -1.69
KLF4O43474 RN7SKP24-201ENST00000515888 284 ntBASIC4.49□□□□□ -1.69
KLF4O43474 RNU6-1332P-201ENST00000516666 104 ntBASIC4.49□□□□□ -1.69
KLF4O43474 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.49□□□□□ -1.69
KLF4O43474 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.49□□□□□ -1.69
KLF4O43474 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.49□□□□□ -1.69
KLF4O43474 AC073539.2-201ENST00000597113 165 ntBASIC4.49□□□□□ -1.69
KLF4O43474 APOOP1-201ENST00000604695 592 ntBASIC4.49□□□□□ -1.69
KLF4O43474 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.49□□□□□ -1.69
KLF4O43474 AC135507.2-201ENST00000612443 309 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AL138726.1-201ENST00000614873 333 ntBASIC4.49□□□□□ -1.69
KLF4O43474 ATP5A1P2-202ENST00000616464 443 ntBASIC4.49□□□□□ -1.69
KLF4O43474 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.49□□□□□ -1.69
KLF4O43474 AC091953.3-201ENST00000623220 236 ntBASIC4.49□□□□□ -1.69
KLF4O43474 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KLF4O43474 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KLF4O43474 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KLF4O43474 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms