Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 OR2A20P-203ENST00000498397 1268 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.86□□□□□ -1.95
HDAC3O15379 SEM1P1-201ENST00000506694 209 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 LTV1P1-201ENST00000510683 1237 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.86□□□□□ -1.95
HDAC3O15379 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 OR5AK1P-201ENST00000524837 922 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.86□□□□□ -1.95
HDAC3O15379 ISCA1P3-201ENST00000577104 373 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 BNIP3P33-201ENST00000598912 569 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC010738.1-201ENST00000604970 987 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC124312.4-201ENST00000605533 310 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 OR2AS2P-201ENST00000606902 342 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AL138880.2-201ENST00000616214 239 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC009090.3-201ENST00000616553 565 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AL136981.2-201ENST00000617319 734 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC068137.4-201ENST00000638485 296 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDAC3O15379 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HDAC3O15379 ASNSP3-201ENST00000451989 1306 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDAC3O15379 AC006378.2-201ENST00000623178 2476 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDAC3O15379 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HDAC3O15379 ARF4P3-201ENST00000397387 509 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 SNRPEP2-201ENST00000397592 279 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 CYCSP45-201ENST00000402289 315 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AL021407.1-201ENST00000404531 386 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 TIMM9P2-201ENST00000419324 266 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AL451062.2-201ENST00000427515 271 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AL159987.2-201ENST00000432754 307 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 MUPP-201ENST00000438111 566 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC3O15379 AC118469.1-201ENST00000442943 488 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 VN1R10P-201ENST00000447106 875 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 PRDX3P3-201ENST00000447765 522 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 PRSS3P4-201ENST00000453323 162 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 MTCO3P2-201ENST00000457365 171 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC3O15379 BZW1P2-201ENST00000473537 826 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC117440.1-201ENST00000474107 571 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 LINC00888-204ENST00000487386 421 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AP001025.2-201ENST00000490908 477 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 RPF2P2-201ENST00000504693 896 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.85□□□□□ -1.95
HDAC3O15379 AC006499.2-201ENST00000513470 337 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 GMPSP1-201ENST00000514075 579 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC117532.1-201ENST00000514638 323 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 FAM60DP-201ENST00000524174 632 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 CYCSP2-201ENST00000558168 301 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC090616.2-202ENST00000584248 222 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC3O15379 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC146944.4-201ENST00000602697 718 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 AC069200.1-201ENST00000609511 323 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC084782.3-201ENST00000612282 578 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC004223.4-201ENST00000612426 332 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC091965.5-201ENST00000624785 342 ntBASIC2.85□□□□□ -1.95
HDAC3O15379 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC3O15379 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HDAC3O15379 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDAC3O15379 CUL1P1-201ENST00000509510 2425 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HDAC3O15379 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HDAC3O15379 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
HDAC3O15379 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HDAC3O15379 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HDAC3O15379 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC016769.3-201ENST00000396562 315 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC073264.1-201ENST00000411508 416 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms