Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OR14L1P-202ENST00000641545 3009 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 RNU6-335P-201ENST00000364563 113 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 SNORA33.2-201ENST00000365413 134 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC117470.1-201ENST00000381974 330 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 RNU6-639P-201ENST00000384074 107 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 COX6CP13-201ENST00000428703 226 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 HMGB3P22-202ENST00000451823 572 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC108860.1-201ENST00000484521 383 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 RNU6-1332P-201ENST00000516666 104 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC105031.1-201ENST00000518550 476 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 RNU6-988P-201ENST00000519081 107 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC002545.1-201ENST00000592511 181 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AL161756.2-201ENST00000604597 246 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC016925.2-201ENST00000605108 242 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 MIR15A-201ENST00000607334 83 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC040896.1-201ENST00000613819 479 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AL022401.1-201ENST00000619498 108 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AC244517.12-201ENST00000623581 663 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 HSPA8P4-201ENST00000511877 1920 ntBASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TMEM88BA6NKF7 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 RNA5SP52-201ENST00000362448 134 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 RNA5SP366-201ENST00000365454 123 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 SNORA75.4-201ENST00000391278 119 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 MIR1290-201ENST00000408735 78 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AC245054.2-201ENST00000415639 319 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 GNG5P5-201ENST00000420444 220 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 SKA2P1-201ENST00000425592 390 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AC011998.1-201ENST00000433403 117 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AL450023.3-201ENST00000440592 271 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 RPL21P41-201ENST00000459863 264 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 SNORA31.20-201ENST00000517111 133 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 DYNLL1P4-201ENST00000549314 266 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 AC026371.1-201ENST00000551867 419 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 MIR4298-201ENST00000584380 73 ntBASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.59□□□□□ -1.51
TMEM88BA6NKF7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
TMEM88BA6NKF7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 SNORD3E-201ENST00000362899 217 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 RNU4-44P-201ENST00000363050 141 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 Y_RNA.145-201ENST00000363527 102 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 CYCSP19-201ENST00000411715 316 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 E2F6P2-201ENST00000420708 748 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AL645608.4-201ENST00000423619 154 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 RPL7P28-201ENST00000437739 740 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 RPL23AP93-201ENST00000440847 484 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AL359672.1-201ENST00000442302 409 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC087588.1-201ENST00000462203 316 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC092451.1-201ENST00000480211 153 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC025164.1-201ENST00000496249 478 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC116337.1-201ENST00000509680 687 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 IGKV2D-23-201ENST00000518179 286 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 NDUFB4P11-201ENST00000560510 395 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 AC093671.1-201ENST00000624981 2929 ntBASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 284.5 ms