Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL136116.1-201ENST00000403591 381 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 RNU2-16P-201ENST00000410712 136 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 CDK8P2-201ENST00000415020 547 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AL158156.1-201ENST00000422509 473 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC007742.1-201ENST00000425789 329 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 RPL23AP83-201ENST00000434984 473 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 ELOCP26-201ENST00000436067 329 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 LARP1BP3-201ENST00000437229 869 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 HSPE1P28-201ENST00000443139 211 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 COX6CP2-201ENST00000444980 225 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 MTCYBP1-201ENST00000454315 1119 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC007967.1-201ENST00000455422 1159 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 FCF1P3-201ENST00000496394 590 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 SNORA31.8-201ENST00000516327 108 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC022861.1-201ENST00000522981 663 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AP000873.5-201ENST00000533906 236 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC012435.1-202ENST00000568772 240 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 VN1R92P-201ENST00000598511 928 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 U73023.1-201ENST00000603134 700 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC073648.5-201ENST00000603502 305 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC092354.1-201ENST00000606057 376 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC106028.5-201ENST00000610332 395 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC096577.2-201ENST00000611455 153 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC025594.3-201ENST00000613068 790 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 MIR7844-201ENST00000616161 122 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC018816.2-201ENST00000621460 353 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 AC127502.3-201ENST00000636170 1206 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX43Q9NXZ2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP197-201ENST00000363357 119 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 SNORA75-201ENST00000384158 137 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 DHFRP6-201ENST00000401776 268 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL663109.1-201ENST00000411498 844 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 MTCO1P39-201ENST00000426148 480 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 C8orf59P1-201ENST00000429930 303 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 BX679664.1-201ENST00000434429 253 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RABEPKP1-201ENST00000440529 1026 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 USP9YP29-201ENST00000445112 563 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ZNF114P1-201ENST00000453500 292 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RNU6-956P-201ENST00000458868 103 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RN7SL442P-201ENST00000473804 320 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC023424.2-201ENST00000493479 777 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC093278.1-201ENST00000494700 600 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC134698.4-201ENST00000523451 826 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL845331.3-202ENST00000562856 261 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AP001029.3-201ENST00000588063 596 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC087752.4-201ENST00000605911 462 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AL139286.2-201ENST00000606838 396 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 AC015540.1-201ENST00000615828 501 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX43Q9NXZ2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms