Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
EPHB3P54753 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC093535.2-201ENST00000624769 2326 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.73□□□□□ -1.65
EPHB3P54753 DHX9P1-201ENST00000436565 3076 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC009902.3-201ENST00000606235 2172 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
EPHB3P54753 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
EPHB3P54753 RNU5A-8P-201ENST00000364102 114 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 Y_RNA.234-201ENST00000364409 97 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 U3.11-201ENST00000364476 212 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 RNU6-1029P-201ENST00000384109 107 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 RNU6-146P-201ENST00000384602 108 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 RNU6-310P-201ENST00000384655 107 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 Y_RNA.574-201ENST00000384766 95 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 RNU2-3P-201ENST00000410144 191 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 ATG3P1-201ENST00000419507 911 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 RPL12P46-201ENST00000436610 195 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.73□□□□□ -1.65
EPHB3P54753 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 AL589765.3-201ENST00000446084 462 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 RPL23AP43-201ENST00000446445 471 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 EEF1A1P1-201ENST00000447052 739 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC012671.1-201ENST00000451912 203 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC053481.1-201ENST00000467217 306 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC116562.3-201ENST00000506136 177 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC079140.5-201ENST00000507882 310 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 FTH1P21-201ENST00000512179 511 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC018797.3-201ENST00000513388 1241 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC009812.2-201ENST00000517657 457 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC068587.5-201ENST00000528506 175 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 MTCO3P23-201ENST00000561363 289 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC060771.1-201ENST00000582031 164 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 MIR3138-201ENST00000585238 82 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 IPO5P1-202ENST00000600039 287 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 ARF4P1-201ENST00000605447 541 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 AL365434.2-201ENST00000607979 234 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC020634.1-201ENST00000608701 549 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 AC023043.4-201ENST00000612081 449 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AP001486.3-201ENST00000615334 372 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AL162373.1-201ENST00000620433 407 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AP000843.1-201ENST00000624880 701 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.73□□□□□ -1.65
EPHB3P54753 CYP3A51P-201ENST00000633513 256 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AC008013.2-202ENST00000637965 364 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 AL049641.1-201ENST00000441055 1948 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 CPHL1P-201ENST00000461341 3407 ntBASIC4.73□□□□□ -1.65
EPHB3P54753 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHB3P54753 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
EPHB3P54753 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
EPHB3P54753 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHB3P54753 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHB3P54753 RNU6-379P-201ENST00000363813 104 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 Y_RNA.252-201ENST00000364556 101 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 Y_RNA.527-201ENST00000384573 102 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 Y_RNA.556-201ENST00000384677 113 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AL360182.1-201ENST00000397433 468 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 RNU4-61P-201ENST00000411243 107 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 CTSL3P-202ENST00000412179 788 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 RPL31P45-201ENST00000419532 356 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC096644.2-201ENST00000429278 159 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHB3P54753 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.72□□□□□ -1.65
EPHB3P54753 AC020550.1-201ENST00000447385 163 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHB3P54753 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHB3P54753 RPL7P43-201ENST00000478876 753 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC020890.1-201ENST00000491837 504 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHB3P54753 RPS27P27-201ENST00000498779 255 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHB3P54753 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHB3P54753 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
EPHB3P54753 RNU6-1038P-201ENST00000516516 104 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 RNU6-256P-201ENST00000516747 97 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 RNA5SP503-201ENST00000517047 117 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC090136.1-201ENST00000520009 240 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 MTND4P7-201ENST00000523876 130 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHB3P54753 MIR3672-201ENST00000584290 82 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC011477.5-201ENST00000586571 259 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC023043.2-201ENST00000589678 1026 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms