Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNA5SP249-201ENST00000516127 99 ntBASIC4.55□□□□□ -1.68
KLF4O43474 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.55□□□□□ -1.68
KLF4O43474 IGKV2D-19-201ENST00000523346 262 ntBASIC4.55□□□□□ -1.68
KLF4O43474 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.55□□□□□ -1.68
KLF4O43474 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.55□□□□□ -1.68
KLF4O43474 AL157871.3-201ENST00000557231 293 ntBASIC4.55□□□□□ -1.68
KLF4O43474 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.55□□□□□ -1.68
KLF4O43474 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.55□□□□□ -1.68
KLF4O43474 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.55□□□□□ -1.68
KLF4O43474 CYCSP40-201ENST00000575927 294 ntBASIC4.55□□□□□ -1.68
KLF4O43474 MIR4790-201ENST00000577799 79 ntBASIC4.55□□□□□ -1.68
KLF4O43474 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.55□□□□□ -1.68
KLF4O43474 AC044792.1-201ENST00000593294 196 ntBASIC4.55□□□□□ -1.68
KLF4O43474 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.55□□□□□ -1.68
KLF4O43474 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.55□□□□□ -1.68
KLF4O43474 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KLF4O43474 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KLF4O43474 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KLF4O43474 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
KLF4O43474 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.54□□□□□ -1.68
KLF4O43474 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KLF4O43474 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 SNURFL-201ENST00000309296 343 ntBASIC4.54□□□□□ -1.68
KLF4O43474 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.54□□□□□ -1.68
KLF4O43474 DEFB109C-201ENST00000382575 264 ntBASIC4.54□□□□□ -1.68
KLF4O43474 DEFB109B-201ENST00000382656 264 ntBASIC4.54□□□□□ -1.68
KLF4O43474 SAR1AP4-201ENST00000429225 591 ntBASIC4.54□□□□□ -1.68
KLF4O43474 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.54□□□□□ -1.68
KLF4O43474 AC073063.1-201ENST00000434352 607 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.54□□□□□ -1.68
KLF4O43474 HSFY6P-201ENST00000445573 403 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.54□□□□□ -1.68
KLF4O43474 RN7SL517P-201ENST00000462240 305 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC020890.1-201ENST00000491837 504 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.54□□□□□ -1.68
KLF4O43474 RNU6-1069P-201ENST00000516612 133 ntBASIC4.54□□□□□ -1.68
KLF4O43474 CDH12P4-201ENST00000517835 295 ntBASIC4.54□□□□□ -1.68
KLF4O43474 CDH12P3-201ENST00000517935 295 ntBASIC4.54□□□□□ -1.68
KLF4O43474 CDH12P1-201ENST00000518435 295 ntBASIC4.54□□□□□ -1.68
KLF4O43474 RNU6-323P-201ENST00000521915 107 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.54□□□□□ -1.68
KLF4O43474 TRAV28-201ENST00000557548 323 ntBASIC4.54□□□□□ -1.68
KLF4O43474 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.54□□□□□ -1.68
KLF4O43474 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.54□□□□□ -1.68
KLF4O43474 AC020910.3-201ENST00000603701 874 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC093799.2-201ENST00000610062 578 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AL442067.2-201ENST00000614033 363 ntBASIC4.54□□□□□ -1.68
KLF4O43474 MIR8069-1-201ENST00000616627 86 ntBASIC4.54□□□□□ -1.68
KLF4O43474 LINC00901.1-201ENST00000617252 152 ntBASIC4.54□□□□□ -1.68
KLF4O43474 MIR8069-2-201ENST00000621412 86 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
KLF4O43474 AL133216.2-202ENST00000634512 349 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC000123.3-201ENST00000624029 4975 ntBASIC4.54□□□□□ -1.68
KLF4O43474 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.54□□□□□ -1.68
KLF4O43474 AL672296.1-201ENST00000427780 2158 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AC007785.2-201ENST00000598627 1916 ntBASIC4.54□□□□□ -1.68
KLF4O43474 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.54□□□□□ -1.68
KLF4O43474 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KLF4O43474 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
KLF4O43474 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.53□□□□□ -1.68
KLF4O43474 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
KLF4O43474 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 FAM35BP-202ENST00000497389 3337 ntBASIC4.53□□□□□ -1.68
KLF4O43474 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KLF4O43474 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KLF4O43474 RN7SKP104-201ENST00000362605 328 ntBASIC4.53□□□□□ -1.68
KLF4O43474 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
KLF4O43474 RNU6-1179P-201ENST00000384667 107 ntBASIC4.53□□□□□ -1.68
KLF4O43474 MIR493-201ENST00000385254 89 ntBASIC4.53□□□□□ -1.68
KLF4O43474 RNU6-1197P-201ENST00000391183 107 ntBASIC4.53□□□□□ -1.68
KLF4O43474 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.53□□□□□ -1.68
KLF4O43474 MTCO2P27-201ENST00000420740 428 ntBASIC4.53□□□□□ -1.68
KLF4O43474 AL158156.1-201ENST00000422509 473 ntBASIC4.53□□□□□ -1.68
KLF4O43474 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.53□□□□□ -1.68
KLF4O43474 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.53□□□□□ -1.68
KLF4O43474 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.53□□□□□ -1.68
KLF4O43474 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.53□□□□□ -1.68
KLF4O43474 AL445433.1-201ENST00000457507 257 ntBASIC4.53□□□□□ -1.68
KLF4O43474 RPL7P5-201ENST00000471472 736 ntBASIC4.53□□□□□ -1.68
KLF4O43474 KC877373.1-201ENST00000479066 408 ntBASIC4.53□□□□□ -1.68
KLF4O43474 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.53□□□□□ -1.68
KLF4O43474 AC068587.1-201ENST00000483613 781 ntBASIC4.53□□□□□ -1.68
KLF4O43474 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.53□□□□□ -1.68
KLF4O43474 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.53□□□□□ -1.68
KLF4O43474 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.53□□□□□ -1.68
KLF4O43474 MIR5692C1-201ENST00000585309 91 ntBASIC4.53□□□□□ -1.68
KLF4O43474 AC023043.2-201ENST00000589678 1026 ntBASIC4.53□□□□□ -1.68
KLF4O43474 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.53□□□□□ -1.68
KLF4O43474 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms