Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 Z75741.1-201ENST00000446793 314 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 OR6C5P-201ENST00000452388 923 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RPS27AP8-201ENST00000452665 445 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC3O15379 AC034236.1-201ENST00000469891 373 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 MTND3P7-201ENST00000474435 343 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RN7SL293P-201ENST00000481765 281 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC3O15379 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC3O15379 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC3O15379 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC3O15379 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.88□□□□□ -1.95
HDAC3O15379 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC3O15379 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC3O15379 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC3O15379 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AC112220.3-201ENST00000605502 502 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AC090115.4-201ENST00000609970 188 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 MIR6076-201ENST00000617521 113 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AL603755.1-201ENST00000619504 163 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AC012314.7-201ENST00000619693 93 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.88□□□□□ -1.95
HDAC3O15379 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDAC3O15379 MTCO1P12-201ENST00000414273 1543 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC3O15379 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC3O15379 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MIR1284-201ENST00000408337 120 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC3O15379 RPL7P8-201ENST00000411964 730 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 SSXP9-201ENST00000417503 292 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AL365203.2-201ENST00000423444 196 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC3O15379 LSM1P1-201ENST00000438629 273 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MTCYBP34-201ENST00000439552 670 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MTND2P20-201ENST00000440805 661 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 UBE2D3P4-201ENST00000441973 436 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MTCO1P48-201ENST00000448024 1096 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC104073.1-201ENST00000451988 151 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 HMGN3P1-201ENST00000453847 193 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC3O15379 RPS3AP43-201ENST00000479743 781 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC082651.2-201ENST00000496833 166 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC004062.1-201ENST00000509926 645 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC3O15379 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HDAC3O15379 RNU6-232P-201ENST00000517144 64 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 DUXAP2-201ENST00000519198 589 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC3O15379 AL512347.1-201ENST00000566420 503 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC002400.1-201ENST00000569310 726 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC011260.1-201ENST00000578420 472 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC3O15379 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC3O15379 AC006539.2-201ENST00000601729 572 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC024220.1-201ENST00000603675 484 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC006270.3-201ENST00000605967 1036 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AL451064.1-201ENST00000607718 471 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC015967.1-201ENST00000619893 476 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC079248.2-201ENST00000623779 326 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.87□□□□□ -1.95
HDAC3O15379 U6.105-201ENST00000637379 88 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC005539.1-201ENST00000443768 1479 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 AC090740.1-201ENST00000623193 2262 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MTND5P28-201ENST00000438005 1594 ntBASIC2.87□□□□□ -1.95
HDAC3O15379 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC3O15379 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HDAC3O15379 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDAC3O15379 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HDAC3O15379 RNU6-553P-201ENST00000364047 96 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 Y_RNA.318-201ENST00000365131 97 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 MIR7-3-201ENST00000384898 110 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 MIR183-201ENST00000384958 110 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 MIR506-201ENST00000384998 124 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 RAD23BP2-201ENST00000416003 1207 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC3O15379 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AC234781.2-201ENST00000426370 994 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.86□□□□□ -1.95
HDAC3O15379 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.86□□□□□ -1.95
HDAC3O15379 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 THAP5P1-201ENST00000439089 262 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 MTND2P4-201ENST00000445034 1004 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC3O15379 GSTA11P-201ENST00000452866 669 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC3O15379 AC092757.1-201ENST00000467293 467 ntBASIC2.86□□□□□ -1.95
HDAC3O15379 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms