Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RNF10P1-201ENST00000418589 369 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AL133173.1-201ENST00000423458 397 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 C4BPAP2-201ENST00000428434 478 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 MYL8P-204ENST00000431574 518 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC092573.2-201ENST00000434546 243 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC133134.1-201ENST00000466800 359 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RPS4XP1-201ENST00000482189 787 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RPS15AP34-201ENST00000487776 387 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC008953.1-201ENST00000497334 318 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 BNIP3P5-201ENST00000562290 498 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC008962.1-201ENST00000605729 304 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC034102.8-201ENST00000615146 484 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB9Q9Y5E1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-595P-201ENST00000363944 107 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU1-146P-201ENST00000364015 165 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNY1-201ENST00000364228 113 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 MIR550A3-201ENST00000390735 95 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-700P-201ENST00000391043 107 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 SNORD58.1-201ENST00000391313 66 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL645733.1-201ENST00000402250 217 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL009179.1-201ENST00000406085 265 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL451062.2-201ENST00000427515 271 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RPL12P46-201ENST00000436610 195 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL450023.1-201ENST00000450868 751 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-1037P-201ENST00000459571 107 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC007016.1-201ENST00000512110 244 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 APOOP4-201ENST00000513530 597 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU1-86P-201ENST00000516108 154 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 RNU1-107P-201ENST00000516617 154 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 MIR5696-201ENST00000578474 85 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC010900.2-201ENST00000604508 210 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AC068870.2-201ENST00000620635 389 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB9Q9Y5E1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AC093671.1-201ENST00000624981 2929 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-280P-201ENST00000364145 104 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-1317P-201ENST00000364582 104 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 SNORA70E-201ENST00000384492 135 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RNU11-201ENST00000387069 134 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RNU2-33P-201ENST00000410344 192 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AC104332.1-201ENST00000440471 797 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AL590399.6-201ENST00000446396 307 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AL139109.1-201ENST00000455491 297 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 RPL7AP6-201ENST00000477943 801 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AC098869.1-201ENST00000481627 292 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 AC022493.1-201ENST00000492984 337 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 HMGN1P11-201ENST00000508668 303 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 GMPSP1-201ENST00000514075 579 ntBASIC5.63□□□□□ -1.51
PCDHB9Q9Y5E1 SNORA31.6-201ENST00000516241 130 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms