Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RPL23AP88-201ENST00000605759 454 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC100814.1-201ENST00000606963 623 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC005156.1-201ENST00000613371 573 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 RNU6-98P-201ENST00000384173 107 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 SNORA67.5-201ENST00000391036 107 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 RAD23BP2-201ENST00000416003 1207 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 MTND4LP14-201ENST00000429447 288 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 RPS29P12-201ENST00000460178 152 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC104435.1-201ENST00000483483 166 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 MTCO1P31-201ENST00000506355 492 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 MTND5P4-201ENST00000514978 288 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 MTCO1P30-201ENST00000515244 580 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 RNA5SP182-201ENST00000516064 82 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC104986.1-201ENST00000517978 436 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC087241.2-201ENST00000535801 324 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC018754.1-201ENST00000607486 925 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 MIR1264-201ENST00000616374 69 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC025016.1-201ENST00000616746 682 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AC022079.2-201ENST00000619739 566 ntBASIC2.48□□□□□ -2.01
SHANK3Q9BYB0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 ARL5AP2-201ENST00000444698 533 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC017099.1-201ENST00000448261 1028 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 ARL4AP2-201ENST00000507378 601 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC098799.2-201ENST00000509466 868 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 RNA5SP220-201ENST00000516298 104 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 CIR1P1-201ENST00000524055 1133 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 OR4P1P-201ENST00000530808 1136 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AC083865.1-201ENST00000636634 831 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AL353746.1-201ENST00000566293 6881 ntBASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHANK3Q9BYB0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 DNAJC19P6-201ENST00000401853 280 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 RNU2-17P-201ENST00000410290 190 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AL513331.1-201ENST00000411908 397 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 Z82209.1-201ENST00000422141 2135 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 RPL7P37-201ENST00000425095 738 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 RPL7P29-201ENST00000437151 728 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 RPL23AP33-201ENST00000442301 452 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 XKRY2-201ENST00000442362 1093 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 TTC39CP1-201ENST00000512513 755 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AP004242.1-201ENST00000533701 349 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 MIR6515-201ENST00000619843 57 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 AC024595.1-201ENST00000623088 387 ntBASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SHANK3Q9BYB0 SNORD51.1-201ENST00000365405 77 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 RNU6-883P-201ENST00000384597 107 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 MIR153-1-201ENST00000384914 90 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 U3.37-201ENST00000408528 213 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC092745.2-202ENST00000411880 369 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 TRIM60P13-201ENST00000432350 1283 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 MTND3P4-201ENST00000453537 303 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC027673.1-201ENST00000456245 405 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC008494.2-201ENST00000514544 370 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 SNORA25.15-201ENST00000516487 89 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC025918.2-201ENST00000558683 763 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC233266.2-201ENST00000567067 528 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 MIR5089-201ENST00000580047 84 ntBASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.45□□□□□ -2.02
SHANK3Q9BYB0 AP003117.1-201ENST00000602771 554 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms