Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AL449363.1-201ENST00000617815 186 ntBASIC1.59□□□□□ -2.15
TRAV13-1A0A0B4J241 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV13-1A0A0B4J241 AC010872.1-201ENST00000624225 675 ntBASIC1.59□□□□□ -2.15
TRAV13-1A0A0B4J241 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV13-1A0A0B4J241 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 NUP58P1-201ENST00000502546 1738 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 OR5J1P-201ENST00000313544 939 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-1155P-201ENST00000363554 107 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 OR5H15-201ENST00000383696 930 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-220P-201ENST00000390919 107 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 COTL1P1-201ENST00000422309 375 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC019097.1-201ENST00000424783 735 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 MYL8P-204ENST00000431574 518 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 KLF3P2-201ENST00000465138 268 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AL359273.1-201ENST00000510918 627 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-27P-201ENST00000516146 107 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC009268.1-201ENST00000561352 1203 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 MIR3921-201ENST00000577308 85 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AL450336.1-201ENST00000605180 586 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AL137246.1-201ENST00000607072 977 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AP001486.3-201ENST00000615334 372 ntBASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TRAV13-1A0A0B4J241 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 ENSAP3-201ENST00000312710 333 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 DEFB108F-201ENST00000344638 222 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-1339P-201ENST00000363574 91 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-882P-201ENST00000391025 103 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 CIR1P3-201ENST00000405137 479 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC099548.1-201ENST00000421443 426 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC107083.1-201ENST00000439643 279 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 CABYRP1-201ENST00000465493 1045 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC109486.1-201ENST00000486833 374 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC023141.11-201ENST00000508864 202 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 SCARNA17.1-201ENST00000516211 143 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 SCARNA17.2-201ENST00000516334 143 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 RNU6-889P-201ENST00000517189 103 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 SCARNA11.3-201ENST00000517276 130 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 DEFB108D-201ENST00000527787 222 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 UBTFL10-201ENST00000528532 562 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC004217.3-201ENST00000551552 878 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 ANP32BP3-201ENST00000559213 706 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC027104.1-201ENST00000563702 681 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC021851.1-201ENST00000608537 1082 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 SCARNA17.4-201ENST00000614296 143 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC009318.4-201ENST00000620496 486 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 uc_338.20-201ENST00000621563 178 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC098679.5-201ENST00000624394 571 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AL160394.1-201ENST00000624765 724 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 OR5H6-203ENST00000642105 978 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AC080128.1-201ENST00000474389 1917 ntBASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
TRAV13-1A0A0B4J241 OR56A5-201ENST00000340110 738 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 MIR518C-201ENST00000384822 101 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AL591416.1-201ENST00000404015 867 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AC009237.2-201ENST00000421358 284 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AC091390.3-201ENST00000426478 338 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AC025750.2-201ENST00000442609 450 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 RAC1P7-201ENST00000445367 377 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 DNAJC19P8-201ENST00000452887 259 ntBASIC1.56□□□□□ -2.16
TRAV13-1A0A0B4J241 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms