Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC3O15379 AL357075.1-201ENST00000404107 726 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 RNU4-72P-201ENST00000410754 173 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.93□□□□□ -1.94
HDAC3O15379 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 RPS25P9-201ENST00000435591 252 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MTND4P32-201ENST00000437189 1237 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MTND5P2-201ENST00000442927 1142 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC016696.1-201ENST00000446949 318 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 RNU7-125P-201ENST00000458760 62 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 snoU13.4-201ENST00000458916 104 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MTND1P16-201ENST00000465177 898 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC009901.1-201ENST00000506703 541 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC105313.1-201ENST00000509121 353 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC109445.1-201ENST00000512356 383 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC016065.2-201ENST00000514530 444 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC105185.1-201ENST00000518705 535 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC027309.2-201ENST00000520566 192 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.93□□□□□ -1.94
HDAC3O15379 ERHP1-201ENST00000523006 310 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AP003461.1-201ENST00000528866 78 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AL356057.1-201ENST00000533798 831 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC135628.1-201ENST00000568867 534 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 OR4K7P-201ENST00000580232 945 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC010620.1-201ENST00000601088 1102 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC072039.2-201ENST00000608883 439 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 AP001521.1-201ENST00000609150 300 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC002064.3-201ENST00000623448 346 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 AC120349.2-201ENST00000625002 298 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MIR3974-201ENST00000637126 96 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
HDAC3O15379 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
HDAC3O15379 AC107982.1-201ENST00000507171 1300 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 DBF4P1-201ENST00000412976 1892 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 Y_RNA.311-201ENST00000365068 96 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 RNU6-629P-201ENST00000384061 103 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 RNU6-441P-201ENST00000384545 106 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HDAC3O15379 TAF9BP1-201ENST00000396646 746 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 AL356131.1-201ENST00000405826 414 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 MIR1302-8-201ENST00000408342 128 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 SNORD88.1-201ENST00000408684 91 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 HMGN2P35-201ENST00000412164 270 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AL606662.1-201ENST00000445763 553 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC109925.1-201ENST00000478069 331 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 OR4G11P-201ENST00000492842 939 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC147055.4-201ENST00000504399 745 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 AC006499.5-201ENST00000505037 514 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 OR5G4P-201ENST00000525251 760 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.92□□□□□ -1.94
HDAC3O15379 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.92□□□□□ -1.94
HDAC3O15379 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC125611.2-201ENST00000551907 647 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC011611.1-201ENST00000552179 197 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC090888.1-201ENST00000561335 1141 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC107954.1-201ENST00000565906 727 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC110760.3-201ENST00000598794 467 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 Z99497.2-201ENST00000603634 310 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 DPRXP5-201ENST00000604662 539 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC069234.5-201ENST00000611056 416 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AL020991.1-201ENST00000612314 373 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC005332.6-201ENST00000613178 446 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC3O15379 AC018755.4-201ENST00000619715 454 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms