Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 COX6CP13-201ENST00000428703 226 ntBASIC4.67□□□□□ -1.66
KLF4O43474 HMGB1P18-201ENST00000438801 619 ntBASIC4.67□□□□□ -1.66
KLF4O43474 RPL12P3-201ENST00000440080 396 ntBASIC4.67□□□□□ -1.66
KLF4O43474 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
KLF4O43474 PRPS1P1-201ENST00000445305 876 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KLF4O43474 RPS20P22-201ENST00000473700 357 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AP000926.1-201ENST00000479573 241 ntBASIC4.67□□□□□ -1.66
KLF4O43474 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
KLF4O43474 MTCO1P29-201ENST00000496868 288 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.67□□□□□ -1.66
KLF4O43474 AC112206.3-201ENST00000514578 389 ntBASIC4.67□□□□□ -1.66
KLF4O43474 RNU6-914P-201ENST00000516749 109 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AP001804.3-201ENST00000525146 880 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.67□□□□□ -1.66
KLF4O43474 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KLF4O43474 AC026464.5-201ENST00000562497 722 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.67□□□□□ -1.66
KLF4O43474 RPL23AP87-202ENST00000573039 466 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.67□□□□□ -1.66
KLF4O43474 AC006270.2-201ENST00000578523 652 ntBASIC4.67□□□□□ -1.66
KLF4O43474 MIR4795-201ENST00000584182 89 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.67□□□□□ -1.66
KLF4O43474 AC006116.3-201ENST00000592968 361 ntBASIC4.67□□□□□ -1.66
KLF4O43474 MIR15A-201ENST00000607334 83 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AP003400.5-201ENST00000624827 617 ntBASIC4.67□□□□□ -1.66
KLF4O43474 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KLF4O43474 AC008568.2-201ENST00000623862 2313 ntBASIC4.67□□□□□ -1.66
KLF4O43474 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KLF4O43474 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
KLF4O43474 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KLF4O43474 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KLF4O43474 RNA5SP305-201ENST00000362665 119 ntBASIC4.66□□□□□ -1.66
KLF4O43474 Y_RNA.384-201ENST00000383909 102 ntBASIC4.66□□□□□ -1.66
KLF4O43474 Y_RNA.535-201ENST00000384612 99 ntBASIC4.66□□□□□ -1.66
KLF4O43474 U3.36-201ENST00000408418 213 ntBASIC4.66□□□□□ -1.66
KLF4O43474 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.66□□□□□ -1.66
KLF4O43474 PSMD10P3-201ENST00000437000 448 ntBASIC4.66□□□□□ -1.66
KLF4O43474 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.66□□□□□ -1.66
KLF4O43474 RNU7-167P-201ENST00000459160 62 ntBASIC4.66□□□□□ -1.66
KLF4O43474 AC083982.1-201ENST00000485679 344 ntBASIC4.66□□□□□ -1.66
KLF4O43474 RN7SL441P-201ENST00000492388 296 ntBASIC4.66□□□□□ -1.66
KLF4O43474 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.66□□□□□ -1.66
KLF4O43474 APOOP4-201ENST00000513530 597 ntBASIC4.66□□□□□ -1.66
KLF4O43474 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.66□□□□□ -1.66
KLF4O43474 MYL12AP1-201ENST00000518490 515 ntBASIC4.66□□□□□ -1.66
KLF4O43474 HIGD1AP5-201ENST00000529959 259 ntBASIC4.66□□□□□ -1.66
KLF4O43474 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.66□□□□□ -1.66
KLF4O43474 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
KLF4O43474 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.66□□□□□ -1.66
KLF4O43474 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.66□□□□□ -1.66
KLF4O43474 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.66□□□□□ -1.66
KLF4O43474 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 AL121757.2-201ENST00000611223 313 ntBASIC4.66□□□□□ -1.66
KLF4O43474 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.66□□□□□ -1.66
KLF4O43474 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.66□□□□□ -1.66
KLF4O43474 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 AL022322.2-201ENST00000624072 20397 ntBASIC4.66□□□□□ -1.66
KLF4O43474 USP8P1-201ENST00000494673 3183 ntBASIC4.66□□□□□ -1.66
KLF4O43474 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KLF4O43474 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.66□□□□□ -1.66
KLF4O43474 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
KLF4O43474 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
KLF4O43474 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KLF4O43474 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
KLF4O43474 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KLF4O43474 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KLF4O43474 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.65□□□□□ -1.66
KLF4O43474 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.65□□□□□ -1.66
KLF4O43474 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.65□□□□□ -1.66
KLF4O43474 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KLF4O43474 RNU6-1167P-201ENST00000363227 94 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RN7SKP44-201ENST00000363602 316 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RNU4-76P-201ENST00000364509 141 ntBASIC4.65□□□□□ -1.67
KLF4O43474 MIR1182-201ENST00000408363 97 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
KLF4O43474 BX682237.1-201ENST00000415016 335 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 AL590762.4-201ENST00000425885 253 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AL451062.2-201ENST00000427515 271 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RPS29P10-201ENST00000439197 166 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.65□□□□□ -1.67
KLF4O43474 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.65□□□□□ -1.67
KLF4O43474 AL356981.1-201ENST00000454879 684 ntBASIC4.65□□□□□ -1.67
KLF4O43474 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 RPL31P60-201ENST00000478450 367 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AL160314.1-201ENST00000490836 438 ntBASIC4.65□□□□□ -1.67
KLF4O43474 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms