Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPL23AP15-201ENST00000450202 459 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AC107399.1-201ENST00000451226 265 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AL583843.1-201ENST00000456070 346 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC006512.1-201ENST00000468816 291 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RPL23AP11-201ENST00000475260 469 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC098591.2-201ENST00000510152 315 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.87□□□□□ -1.63
EPHB3P54753 AP001029.3-201ENST00000588063 596 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC116447.1-201ENST00000613153 453 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 AC125257.1-201ENST00000560400 2930 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
EPHB3P54753 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHB3P54753 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 ADAM5-202ENST00000399789 1942 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AC009229.4-201ENST00000623854 1947 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 AC021146.4-201ENST00000309229 279 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 Y_RNA.149-201ENST00000363558 117 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 Y_RNA.188-201ENST00000363952 111 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 RNU6-702P-201ENST00000364982 107 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 AC068538.1-201ENST00000376856 336 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 ARF4P3-201ENST00000397387 509 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 SDHCP2-201ENST00000398565 501 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 U3.35-201ENST00000408405 208 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 MIR548F5-201ENST00000408421 86 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 RNU6-370P-201ENST00000411008 104 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.86□□□□□ -1.63
EPHB3P54753 RPS26P47-201ENST00000427219 348 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.86□□□□□ -1.63
EPHB3P54753 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.86□□□□□ -1.63
EPHB3P54753 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 ELOCP24-201ENST00000456370 334 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 SCARNA10-201ENST00000459255 330 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.86□□□□□ -1.63
EPHB3P54753 AC004062.1-201ENST00000509926 645 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.86□□□□□ -1.63
EPHB3P54753 RNA5SP249-201ENST00000516127 99 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 RN7SKP219-201ENST00000516825 296 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 MIR3146-201ENST00000580367 79 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 NUTF2P8-201ENST00000604593 363 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 AC007546.1-201ENST00000619452 559 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
EPHB3P54753 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 AL445487.1-201ENST00000415694 1580 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
EPHB3P54753 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHB3P54753 MTND5P10-201ENST00000603719 1809 ntBASIC4.86□□□□□ -1.63
EPHB3P54753 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
EPHB3P54753 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
EPHB3P54753 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
EPHB3P54753 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.85□□□□□ -1.63
EPHB3P54753 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.85□□□□□ -1.63
EPHB3P54753 AL139276.1-201ENST00000311910 1001 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 AL161781.1-201ENST00000354277 403 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 Y_RNA.158-201ENST00000363651 101 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RNU6-178P-201ENST00000384631 104 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 AL121834.1-202ENST00000404494 277 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms