Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Thumpd3P97770 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Thumpd3P97770 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Thumpd3P97770 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Thumpd3P97770 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thumpd3P97770 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Thumpd3P97770 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Gm27463-201ENSMUST00000183569 57 ntBASIC16.65■□□□□ 0.26
Thumpd3P97770 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Thumpd3P97770 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd3P97770 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Thumpd3P97770 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thumpd3P97770 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thumpd3P97770 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thumpd3P97770 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thumpd3P97770 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Thumpd3P97770 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.64■□□□□ 0.25
Thumpd3P97770 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd3P97770 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd3P97770 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.63■□□□□ 0.25
Thumpd3P97770 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd3P97770 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms