Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC138907.8-201ENST00000623981 2256 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AC005183.1-201ENST00000603687 1979 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL159987.1-201ENST00000347911 293 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.785-201ENST00000384290 109 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 SNORA51.11-201ENST00000384442 131 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-790P-201ENST00000384479 105 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 MIR1250-201ENST00000408098 113 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 DPPA2P3-201ENST00000411853 655 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 BX842559.1-201ENST00000419615 532 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 MTND5P15-201ENST00000434246 349 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 RPS17P8-201ENST00000434525 335 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL360271.2-201ENST00000447710 161 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 RPS3AP46-201ENST00000448352 682 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AC093815.1-201ENST00000508637 280 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 ACA59.1-201ENST00000515966 143 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 MIR4716-201ENST00000579628 84 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 LRRC37A5P-203ENST00000580181 585 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL133481.2-203ENST00000607558 139 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 MIR7155-201ENST00000615925 56 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL159153.1-201ENST00000619688 317 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL512643.1-201ENST00000635735 524 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 AL355834.1-201ENST00000556602 3965 ntBASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-398P-201ENST00000384143 109 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.555-201ENST00000384673 110 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 MIR625-201ENST00000385047 85 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 U3.35-201ENST00000408405 208 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 UBE2D3P2-201ENST00000424409 445 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AL132765.1-201ENST00000434165 553 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 GEMIN8P3-201ENST00000445417 720 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 OR2AQ1P-201ENST00000451972 200 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RPS23P6-201ENST00000466136 431 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC231760.1-201ENST00000498002 260 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 HMGB1P35-201ENST00000503360 598 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RPS4XP20-201ENST00000505751 772 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 MTND3P25-201ENST00000509243 135 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC074255.1-201ENST00000511259 501 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-615P-201ENST00000516065 106 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.687-201ENST00000516558 91 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-897P-201ENST00000517135 105 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-111P-201ENST00000517179 105 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 IGKV2D-23-201ENST00000518179 286 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RPL23AP87-202ENST00000573039 466 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 MIR4273-201ENST00000582824 84 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 OR1M4P-201ENST00000589199 287 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC006023.2-201ENST00000609916 167 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 MIR6837-201ENST00000620884 64 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 AC027228.2-201ENST00000567141 2154 ntBASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms