Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 RNU6-317P-201ENST00000384031 107 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 SNORA48.3-201ENST00000391081 134 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 EI24P1-201ENST00000416584 867 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 NEK4P1-201ENST00000433383 879 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AL353898.1-201ENST00000444055 238 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC233279.1-201ENST00000455300 423 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 RNU6-347P-201ENST00000516658 105 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC074029.2-201ENST00000551045 634 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 SUB1P3-201ENST00000564581 315 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 MIR4716-201ENST00000579628 84 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC002984.1-201ENST00000591692 448 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AF127577.6-201ENST00000623352 2191 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC114546.3-201ENST00000623582 1734 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 Z85994.2-201ENST00000434327 452 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 TPTE2P1-204ENST00000435256 593 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 RPS27P5-201ENST00000444247 244 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AL591719.1-201ENST00000444669 744 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AL049870.4-201ENST00000555741 486 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC010546.1-201ENST00000569391 485 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 MIR548Y-201ENST00000582739 110 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC073348.1-201ENST00000623002 331 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC244517.12-201ENST00000623581 663 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 SEPT7P7-201ENST00000420492 1301 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 MIR320B1-201ENST00000390209 79 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC073464.3-201ENST00000422564 712 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 TRIAP1P1-201ENST00000427062 225 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 RNU6-889P-201ENST00000517189 103 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 AP001542.1-201ENST00000591314 200 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 VN1R7P-201ENST00000619242 903 ntBASIC2.73□□□□□ -1.97
SHANK3Q9BYB0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC007342.9-201ENST00000623877 1385 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 MIR583-201ENST00000384846 75 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 SAR1AP2-201ENST00000392696 594 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AL445646.1-201ENST00000431784 216 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 RPL23AP76-201ENST00000441860 458 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 RPL34P26-201ENST00000445636 354 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC010683.1-201ENST00000473673 378 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC009032.1-201ENST00000617574 431 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 AC004943.3-201ENST00000624116 600 ntBASIC2.72□□□□□ -1.97
SHANK3Q9BYB0 MTND4P35-201ENST00000604257 1375 ntBASIC2.71□□□□□ -1.97
SHANK3Q9BYB0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AL512504.1-201ENST00000415494 778 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC092473.1-201ENST00000441098 221 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 USP9YP8-201ENST00000441913 500 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC010265.1-201ENST00000513509 211 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC084757.1-201ENST00000559987 490 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AL160237.3-201ENST00000604114 1013 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC091834.1-201ENST00000614543 472 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC010680.1-201ENST00000590024 3590 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 MIR9-3-201ENST00000385084 90 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 RPL7P31-201ENST00000450192 724 ntBASIC2.71□□□□□ -1.98
SHANK3Q9BYB0 TPMTP4-201ENST00000450749 678 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms