Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HMGB1P48-201ENST00000446155 598 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 RPL21P134-201ENST00000453468 483 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 AL122001.1-201ENST00000457027 370 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.02□□□□□ -1.93
HDAC3O15379 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 AC087879.1-201ENST00000474343 374 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC017015.1-201ENST00000477387 286 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 VPS26AP1-201ENST00000483197 979 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 RPL7P23-201ENST00000493874 747 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 RN7SKP31-201ENST00000516354 278 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 RNU5A-4P-201ENST00000516588 111 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 PAICSP4-201ENST00000517543 1253 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC087808.1-201ENST00000520501 361 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 AP001317.1-201ENST00000531194 960 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.02□□□□□ -1.93
HDAC3O15379 OSBPL9P5-201ENST00000542581 171 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AL110115.1-201ENST00000614396 364 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 AP000676.3-201ENST00000623299 569 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 AC079416.3-201ENST00000624479 549 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC3O15379 AL034408.1-202ENST00000636088 415 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDAC3O15379 RNU6-560P-201ENST00000364007 108 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RNU6-157P-201ENST00000383957 107 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RNU6-837P-201ENST00000391056 108 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AL592114.1-201ENST00000403842 483 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AL133264.1-201ENST00000407157 562 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC3O15379 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 BOLA3P4-201ENST00000418151 400 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC3O15379 USP9YP11-201ENST00000427537 717 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 MTATP6P4-201ENST00000427725 675 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPS6P15-201ENST00000431996 751 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 Z83846.1-201ENST00000446798 265 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 ART2BP-201ENST00000453501 499 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 HMGB1P15-201ENST00000453854 435 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 snoU13.7-201ENST00000459220 104 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL7P15-201ENST00000461190 712 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P39-201ENST00000463605 483 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPS23P3-201ENST00000470993 430 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P93-201ENST00000480465 489 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 MTND2P14-201ENST00000482139 351 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC233702.1-201ENST00000482905 502 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC087190.1-201ENST00000484462 480 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC093591.1-201ENST00000491435 481 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P129-201ENST00000491732 478 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AP002812.1-201ENST00000495378 474 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL21P16-201ENST00000495531 483 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC104090.1-201ENST00000506341 1171 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RNU6-1225P-201ENST00000516336 65 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC3O15379 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDAC3O15379 NBEAP1-201ENST00000554452 979 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AL132657.2-201ENST00000564417 358 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AL354943.1-201ENST00000572103 781 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 MIR4429-201ENST00000580105 73 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.01□□□□□ -1.93
HDAC3O15379 AC131235.4-201ENST00000609288 620 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AL139418.1-201ENST00000613613 177 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC002076.2-201ENST00000617362 122 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AC073348.1-201ENST00000623002 331 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDAC3O15379 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDAC3O15379 Z99496.1-201ENST00000469424 1477 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 AP000776.1-201ENST00000530032 1663 ntBASIC3.01□□□□□ -1.93
HDAC3O15379 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HDAC3O15379 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms