Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 C4BPAP1-201ENST00000415474 1893 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC239868.2-201ENST00000564237 4527 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC005332.5-201ENST00000591222 2919 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 EOGT-210ENST00000615922 1931 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.26-201ENST00000362539 101 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.477-201ENST00000384352 108 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.526-201ENST00000384572 110 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MIR135A2-201ENST00000384854 100 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RNA5SP56-201ENST00000410277 118 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RPL21P91-201ENST00000429231 479 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 ELOCP18-201ENST00000434209 337 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MTND4LP30-201ENST00000454092 297 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC004129.2-201ENST00000457229 287 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 PPIAP21-201ENST00000464473 501 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SL189P-201ENST00000468631 289 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 FO393415.2-201ENST00000480085 343 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC025465.3-201ENST00000510570 311 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 HIGD1AP3-201ENST00000515857 278 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RNU7-4P-201ENST00000516961 62 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC012339.2-201ENST00000523996 453 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AP003385.6-201ENST00000531603 374 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB9Q9Y5E1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.64-201ENST00000362845 102 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.478-201ENST00000384358 107 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-1093P-201ENST00000391194 107 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 HMGB1P20-201ENST00000402555 677 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 MIR548M-201ENST00000408260 86 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC096921.1-201ENST00000411661 375 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AL137014.1-201ENST00000420490 1226 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 EEF1B2P6-201ENST00000445713 673 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC012123.2-201ENST00000485809 248 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SL30P-201ENST00000488416 306 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 GZMAP1-201ENST00000503054 631 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA31.3-201ENST00000516029 96 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SKP82-201ENST00000516786 223 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AL049872.1-201ENST00000556323 322 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC015720.2-201ENST00000567709 334 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC006600.1-201ENST00000572529 153 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 MIR4260-201ENST00000583107 67 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AL160281.1-201ENST00000605307 311 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-85P-201ENST00000605989 107 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 AL591516.1-201ENST00000611326 274 ntBASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 997.3 ms