Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 Y_RNA.518-201ENST00000384552 113 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 MRPL53P1-201ENST00000414323 319 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AL590664.1-201ENST00000448065 339 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AL031274.1-201ENST00000450334 232 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 RNU1-88P-201ENST00000459274 128 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 RPL39P38-201ENST00000467018 153 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA25.11-201ENST00000515935 105 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC069113.1-201ENST00000517763 267 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 IGLV3-30-201ENST00000524362 298 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 HSPE1P20-201ENST00000538133 289 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC084783.1-201ENST00000565846 910 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC096772.1-201ENST00000609146 564 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 AC020633.1-201ENST00000468439 2247 ntBASIC5.89□□□□□ -1.47
PCDHB9Q9Y5E1 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC092747.4-201ENST00000620519 1861 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-371P-201ENST00000364283 108 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 MTCO3P8-201ENST00000453691 755 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 RPL21P41-201ENST00000459863 264 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC091180.1-201ENST00000462104 372 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC018437.1-201ENST00000492214 406 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA70.11-201ENST00000515987 138 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA70.13-201ENST00000516116 138 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC104576.1-201ENST00000524225 88 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 HMGN2P36-201ENST00000529541 409 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 RAC1P9-201ENST00000604990 392 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AL138960.1-201ENST00000613838 513 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC118658.2-201ENST00000618697 459 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AC018445.2-201ENST00000622987 260 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 PABPC1P7-201ENST00000413177 1513 ntBASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB9Q9Y5E1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 PHKBP1-201ENST00000450951 1951 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-817P-201ENST00000391083 104 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SKP106-201ENST00000410832 272 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 CYCSP10-201ENST00000417973 294 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 EI24P4-201ENST00000423683 1078 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC139712.2-201ENST00000424302 339 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AL353997.1-201ENST00000432936 108 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 FTLP19-201ENST00000433300 394 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC073063.1-201ENST00000434352 607 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 DAP3P1-201ENST00000441522 278 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 RPS3AP12-201ENST00000443616 753 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 FCF1P4-201ENST00000448326 183 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-953P-201ENST00000459154 107 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AC137590.2-201ENST00000619709 240 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB9Q9Y5E1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms