Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC108738.1-201ENST00000603703 237 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC004805.2-201ENST00000605382 482 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 RN7SL787P-201ENST00000613000 284 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC132068.1-201ENST00000623805 459 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.55□□□□□ -1.52
NFKB1P19838 Z95327.2-201ENST00000414579 1873 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC074029.4-201ENST00000624796 1859 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NFKB1P19838 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 GVINP1-202ENST00000531871 7271 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.54□□□□□ -1.52
NFKB1P19838 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.54□□□□□ -1.52
NFKB1P19838 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 AL122126.1-201ENST00000546905 1318 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.54□□□□□ -1.52
NFKB1P19838 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NFKB1P19838 RNU4-2-201ENST00000365668 141 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 SNORD70.1-201ENST00000391007 85 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 RNU2-23P-201ENST00000410545 195 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 Z99755.1-201ENST00000414048 380 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AP000281.1-201ENST00000444036 316 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 OSTCP8-201ENST00000445117 448 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AL161636.2-201ENST00000445179 927 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC144530.1-201ENST00000452862 555 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.54□□□□□ -1.52
NFKB1P19838 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 SNORD5.1-201ENST00000458800 75 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 RPS27AP1-201ENST00000475545 471 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 RPL30P11-201ENST00000495304 339 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC026801.1-201ENST00000497178 464 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 RNU6-120P-201ENST00000516077 103 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 RNU6-1332P-201ENST00000516666 104 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC131281.1-201ENST00000522984 164 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC022616.4-201ENST00000522985 181 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 EIF4A2P5-201ENST00000529914 499 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AC023157.2-201ENST00000540596 141 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 AC007375.1-201ENST00000554513 578 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 MIR1273E-201ENST00000581165 102 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
NFKB1P19838 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NFKB1P19838 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 SNORD58B-201ENST00000607313 66 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 AC127024.6-201ENST00000621598 424 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 uc_338.7-201ENST00000621834 124 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 AL606534.2-204ENST00000635008 178 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFKB1P19838 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
NFKB1P19838 GABPAP-201ENST00000419271 1356 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
NFKB1P19838 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
NFKB1P19838 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
NFKB1P19838 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 AP005435.3-201ENST00000531260 3198 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
NFKB1P19838 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 MTND5P7-201ENST00000413558 1798 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 RNU6-432P-201ENST00000384196 109 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RNU6-472P-201ENST00000384299 107 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RNU6-95P-201ENST00000384697 107 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 U3.25-201ENST00000391209 220 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RN7SKP286-201ENST00000410894 299 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 SDHDP6-201ENST00000414693 480 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 AL353597.2-202ENST00000434901 373 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RPL35AP22-201ENST00000436855 335 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AL390119.1-201ENST00000440329 312 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 Z95327.1-201ENST00000446082 482 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.53□□□□□ -1.52
NFKB1P19838 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 AC010733.1-201ENST00000451515 401 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NFKB1P19838 RPS3AP41-201ENST00000462701 778 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms