Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.17□□□□□ -1.9
HDAC3O15379 AC008494.2-201ENST00000514544 370 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC023632.1-201ENST00000518463 375 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC3O15379 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC3O15379 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 AL157394.1-201ENST00000562983 1224 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC010653.1-201ENST00000571108 881 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC093227.2-201ENST00000589357 285 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 VN1R88P-201ENST00000596787 292 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 NTAN1P1-201ENST00000603150 646 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 ELOCP35-201ENST00000604289 336 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL590282.1-201ENST00000610379 1136 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC018926.3-201ENST00000618841 406 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC013470.4-201ENST00000619978 986 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.17□□□□□ -1.9
HDAC3O15379 LINC02211-204ENST00000642024 1070 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HDAC3O15379 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC3O15379 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC3O15379 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 MTND4P8-201ENST00000514997 1362 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 RNU6-636P-201ENST00000384598 107 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 RN7SKP202-201ENST00000410439 330 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 OR4K6P-201ENST00000416478 897 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC234782.4-201ENST00000417646 1048 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC3O15379 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC002542.1-201ENST00000440683 193 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 Z77249.1-201ENST00000444622 1175 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 CDC27P1-201ENST00000445384 715 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 Z73417.1-201ENST00000447373 778 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 BX248409.1-201ENST00000455497 255 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC3O15379 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC091951.3-201ENST00000504093 246 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 BOLA3P3-201ENST00000505182 232 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 RNU1-45P-201ENST00000517191 141 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 RN7SKP283-201ENST00000517197 270 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC109635.4-202ENST00000531666 412 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC044913.1-201ENST00000557200 430 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC009097.3-201ENST00000563557 1018 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC3O15379 MIR5708-201ENST00000579723 85 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 MIR4666A-201ENST00000580160 79 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 AC091057.2-201ENST00000602594 792 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 AP000484.1-201ENST00000620067 1252 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
HDAC3O15379 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC3O15379 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC3O15379 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HDAC3O15379 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.15□□□□□ -1.9
HDAC3O15379 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDAC3O15379 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 SNORD116.1-201ENST00000365628 92 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 MIR525-201ENST00000384978 85 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 TAS2R15P-201ENST00000390674 928 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 SFR1P1-201ENST00000403720 688 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 RN7SKP159-201ENST00000410657 292 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC245054.2-201ENST00000415639 319 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 RPL22P18-201ENST00000417197 377 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms