Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 RNU6-50P-201ENST00000362356 103 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 RNU4-68P-201ENST00000364314 141 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 RPL21P17-201ENST00000397467 475 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 AL009174.1-201ENST00000426577 416 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC3O15379 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 CETN4P-201ENST00000432407 469 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 CR769776.1-201ENST00000441254 787 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC140076.1-201ENST00000449897 361 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 RBMY2UP-201ENST00000453474 324 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC005410.1-202ENST00000460347 485 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 AC015724.1-201ENST00000478577 156 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 APOOP4-201ENST00000513530 597 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 MRPS36P3-201ENST00000519284 130 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 MTND2P38-201ENST00000522536 667 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC010306.1-201ENST00000523223 1117 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 AC124293.1-201ENST00000530034 493 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC023538.1-201ENST00000534576 736 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC245036.5-201ENST00000596330 847 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC113368.1-201ENST00000603736 382 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC025811.1-201ENST00000604312 472 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AP005137.2-201ENST00000609238 400 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 AC068057.2-201ENST00000624047 895 ntBASIC3.18□□□□□ -1.9
HDAC3O15379 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC3O15379 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC3O15379 XPOTP1-201ENST00000443317 2398 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC3O15379 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 RNU6-707P-201ENST00000364647 95 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC3O15379 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 MIR134-201ENST00000385258 73 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 SNORA40.2-201ENST00000390847 128 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL079342.2-201ENST00000403367 482 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL136310.1-201ENST00000404926 654 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL445189.1-201ENST00000405722 338 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 RPL36AP36-201ENST00000418616 301 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 MTCO2P21-201ENST00000419780 677 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 MTCYBP24-201ENST00000420387 1106 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL513175.2-201ENST00000422071 443 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 OR51AB1P-201ENST00000429046 620 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC3O15379 UBE2V1P5-201ENST00000440070 405 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 EEF1A1P39-201ENST00000440791 250 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
HDAC3O15379 NOTCH2P1-201ENST00000443481 624 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL359073.1-201ENST00000448036 403 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL589880.1-201ENST00000448271 287 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 NPM1P13-201ENST00000452663 865 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC3O15379 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC3O15379 RPS27P23-201ENST00000487608 251 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AL024509.2-201ENST00000493462 493 ntBASIC3.17□□□□□ -1.9
HDAC3O15379 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms