Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.1□□□□□ -1.59
EPHB3P54753 AL353777.1-201ENST00000425552 326 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.1□□□□□ -1.59
EPHB3P54753 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 AC068287.1-201ENST00000430283 295 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 MTCO3P21-201ENST00000430791 643 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 ATP5JP1-201ENST00000431631 322 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RPS3AP54-201ENST00000435535 734 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC016831.4-201ENST00000438302 307 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHB3P54753 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.1□□□□□ -1.59
EPHB3P54753 AC119744.1-201ENST00000454746 1715 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 MTND5P22-201ENST00000458380 195 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU6-329P-201ENST00000459618 107 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC090142.1-201ENST00000465776 462 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AL049874.2-201ENST00000492636 288 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 ENPP7P11-201ENST00000505915 627 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC008758.3-201ENST00000507003 1829 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC108043.1-201ENST00000512696 574 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU6-123P-201ENST00000516163 102 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU6-794P-201ENST00000517261 64 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
EPHB3P54753 AL049839.1-201ENST00000556151 657 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 AC009852.2-201ENST00000567898 485 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 HMGB1P6-201ENST00000569046 646 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 MIR3167-201ENST00000579623 85 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC104687.2-201ENST00000604442 342 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AC016925.2-201ENST00000605108 242 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AL121932.1-201ENST00000605542 214 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 BX664608.1-201ENST00000610519 487 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 AC093913.1-201ENST00000614178 329 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHB3P54753 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHB3P54753 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHB3P54753 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.09□□□□□ -1.59
EPHB3P54753 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 AC007823.1-201ENST00000569932 1566 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
EPHB3P54753 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 AL590240.1-201ENST00000334118 313 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 RNU6-657P-201ENST00000383904 107 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 Y_RNA.401-201ENST00000383965 117 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 RNU6-639P-201ENST00000384074 107 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 RNU6-196P-201ENST00000384315 107 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 RNU6-331P-201ENST00000384724 107 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 MT-TR-201ENST00000387439 65 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 GLULP6-201ENST00000399502 913 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AL136116.1-201ENST00000403591 381 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 BTBD10P2-201ENST00000404779 676 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AL590290.1-201ENST00000405336 380 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 RN7SKP58-201ENST00000411010 305 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC069213.2-201ENST00000420238 366 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AL645937.1-202ENST00000421799 937 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 NUP35P1-201ENST00000422734 947 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 HMGN2P27-201ENST00000427352 270 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 SCARNA22-201ENST00000503991 125 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
EPHB3P54753 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 AC093677.1-201ENST00000514414 678 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 RNU4-49P-201ENST00000516080 140 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.09□□□□□ -1.59
EPHB3P54753 AC090502.2-201ENST00000549267 280 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.09□□□□□ -1.59
EPHB3P54753 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.09□□□□□ -1.59
EPHB3P54753 AL389895.1-201ENST00000554127 252 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 DNAJC8P1-201ENST00000554535 372 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.09□□□□□ -1.59
EPHB3P54753 MIR5186-201ENST00000577504 120 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC006270.2-201ENST00000578523 652 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 SNORA74C-1-201ENST00000580726 201 ntBASIC5.09□□□□□ -1.59
EPHB3P54753 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.09□□□□□ -1.59
EPHB3P54753 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.09□□□□□ -1.59
EPHB3P54753 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.09□□□□□ -1.59
EPHB3P54753 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
EPHB3P54753 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
EPHB3P54753 AC010329.2-201ENST00000595195 2737 ntBASIC5.09□□□□□ -1.6
EPHB3P54753 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
EPHB3P54753 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
EPHB3P54753 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.08□□□□□ -1.6
EPHB3P54753 AP002907.1-201ENST00000606361 1430 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 MTND4P14-201ENST00000435799 1354 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 TRIM51GP-201ENST00000534741 1350 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
EPHB3P54753 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms