Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC090017.1-201ENST00000548612 1779 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHB3P54753 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 AL118496.1-201ENST00000440201 1812 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EPHB3P54753 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EPHB3P54753 OR5P1P-201ENST00000299512 925 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC079741.1-201ENST00000321498 212 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EPHB3P54753 Y_RNA.202-201ENST00000364083 110 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 RNU6-474P-201ENST00000384243 107 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 MIR298-201ENST00000401212 88 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 RN7SKP100-201ENST00000411258 284 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 MTND3P8-201ENST00000412909 339 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC119751.6-201ENST00000416712 186 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 GNG5P5-201ENST00000420444 220 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 MTCYBP8-201ENST00000422855 651 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 RSU1P2-202ENST00000437884 485 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 AL450023.3-201ENST00000440592 271 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC011753.3-201ENST00000443436 406 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC022431.1-201ENST00000450941 438 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 RPL23AP56-201ENST00000460778 453 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC112206.3-201ENST00000514578 389 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 IGKV2D-10-201ENST00000520194 281 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHB3P54753 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.18□□□□□ -1.58
EPHB3P54753 AP003181.2-201ENST00000528941 181 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AP006289.1-201ENST00000538089 277 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AP001880.2-201ENST00000538233 448 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC023050.3-201ENST00000541142 333 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHB3P54753 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 AC068714.1-201ENST00000559623 800 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.18□□□□□ -1.58
EPHB3P54753 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 AC124303.1-201ENST00000605703 360 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHB3P54753 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHB3P54753 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHB3P54753 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 OR11H5P-202ENST00000641612 1325 ntBASIC5.18□□□□□ -1.58
EPHB3P54753 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHB3P54753 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.18□□□□□ -1.58
EPHB3P54753 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EPHB3P54753 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
EPHB3P54753 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.17□□□□□ -1.58
EPHB3P54753 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 ADAM24P-201ENST00000398655 2101 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 ERCC6-202ENST00000374127 1782 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 IGKV7-3-201ENST00000357453 298 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 Y_RNA.184-201ENST00000363884 108 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 Y_RNA.381-201ENST00000365666 102 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
EPHB3P54753 Y_RNA.387-201ENST00000383918 102 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 RNU6-398P-201ENST00000384143 109 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 RPL23AP32-201ENST00000395315 459 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL121972.1-201ENST00000402023 252 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 RPS20P2-201ENST00000402520 389 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC016397.1-201ENST00000412463 242 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC114755.2-201ENST00000413520 361 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.17□□□□□ -1.58
EPHB3P54753 OR1AA1P-201ENST00000419597 916 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.17□□□□□ -1.58
EPHB3P54753 NRBF2P3-201ENST00000432731 865 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL606489.2-201ENST00000433886 234 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.17□□□□□ -1.58
EPHB3P54753 GTF2IP13-201ENST00000438487 386 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC016691.1-201ENST00000441321 413 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC006480.1-201ENST00000449887 378 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.17□□□□□ -1.58
EPHB3P54753 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.17□□□□□ -1.58
EPHB3P54753 RPL23AP72-201ENST00000492447 435 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 CEACAMP10-202ENST00000495431 496 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC025674.1-201ENST00000507074 324 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 RNU6-1170P-201ENST00000515974 106 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 258.8 ms