Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC105402.2-201ENST00000438503 358 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 VN1R96P-201ENST00000446052 858 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 AC245517.4-201ENST00000448601 281 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 HMGB1P15-201ENST00000453854 435 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 RPL7P20-201ENST00000520308 745 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 AC122134.1-201ENST00000565664 1104 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 MIR4498-201ENST00000577599 66 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 AC005046.1-201ENST00000608515 625 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 AC109315.1-201ENST00000584143 1347 ntBASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SHANK3Q9BYB0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RNU6-984P-201ENST00000363236 109 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RN7SKP285-201ENST00000410137 318 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC048351.1-201ENST00000420064 602 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC013470.3-201ENST00000420252 1194 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC008280.2-201ENST00000455473 307 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC008565.1-201ENST00000509046 885 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC096725.1-201ENST00000514266 313 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC007621.1-201ENST00000604544 437 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC093311.1-201ENST00000506586 2021 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 Y_RNA.140-201ENST00000363474 103 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RPL21P3-201ENST00000395517 478 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 BTF3P7-201ENST00000407097 488 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RPL23AP36-201ENST00000413895 458 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AP002371.1-201ENST00000463604 433 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC006445.2-201ENST00000510061 472 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 RNU6-943P-201ENST00000516960 98 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 AC025423.2-201ENST00000537570 439 ntBASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
SHANK3Q9BYB0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC245100.2-201ENST00000454544 1679 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AL159169.1-201ENST00000421119 127 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 DYNLL1P6-201ENST00000503440 264 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AP003117.2-201ENST00000606010 545 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 AC004825.2-201ENST00000616634 455 ntBASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
SHANK3Q9BYB0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AL135786.1-201ENST00000415892 214 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 OR2B8P-201ENST00000432841 938 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC092013.1-201ENST00000438795 332 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC245517.2-201ENST00000442890 346 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 RN7SKP210-201ENST00000459176 261 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 EIF2S2P4-201ENST00000461070 984 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC092045.1-201ENST00000495716 1231 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC245166.1-201ENST00000521012 253 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 MIR4781-201ENST00000585250 76 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 ZNF861P-201ENST00000588126 639 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 NF1P10-201ENST00000613227 742 ntBASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK3Q9BYB0 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 SNORA36C-201ENST00000384289 132 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AP000926.3-201ENST00000497201 299 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 278.1 ms