Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RNA5SP110-201ENST00000362638 115 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 Y_RNA.399-201ENST00000383955 105 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL445189.1-201ENST00000405722 338 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL583834.1-201ENST00000406943 343 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RNU6-516P-201ENST00000411381 104 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AC236972.1-201ENST00000433225 199 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 DNAJC19P5-201ENST00000443295 316 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL596266.1-201ENST00000448132 400 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RPL23AP60-201ENST00000450011 454 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 PPIAP3-201ENST00000450588 505 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 CEACAMP4-201ENST00000457676 421 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RPS27AP1-201ENST00000475545 471 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AC135721.1-201ENST00000497954 479 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RPL23AP55-201ENST00000498163 452 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RBBP4P6-201ENST00000508098 202 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AC090022.1-201ENST00000546569 311 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 OR4H6P-201ENST00000563771 921 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 MIR4701-201ENST00000583094 63 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL365434.2-201ENST00000607979 234 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 U2.1-201ENST00000618978 145 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AL049767.1-202ENST00000637826 242 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 AC116667.2-201ENST00000641075 823 ntBASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB9Q9Y5E1 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 GABPAP-201ENST00000419271 1356 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 MAPK10-261ENST00000641050 3109 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RN7SKP292-201ENST00000365522 317 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 Y_RNA.389-201ENST00000383924 113 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 Y_RNA.428-201ENST00000384078 102 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RNU6-432P-201ENST00000384196 109 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 Y_RNA.473-201ENST00000384333 102 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 Y_RNA.489-201ENST00000384410 101 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 MIR130B-202ENST00000385018 82 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RPLP0P7-201ENST00000416050 667 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL353662.1-201ENST00000439099 327 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 CYCSP24-201ENST00000445119 316 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 EEF1A1P1-201ENST00000447052 739 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RN7SL717P-201ENST00000478343 297 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 HIGD1AP14-201ENST00000507617 282 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 SNORA14.1-201ENST00000516113 141 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 SNORD116.3-201ENST00000517176 78 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AP000827.1-201ENST00000527814 258 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL358913.1-201ENST00000554342 121 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC145423.1-201ENST00000605712 336 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC009570.1-201ENST00000609599 745 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL137067.2-201ENST00000621202 131 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL161637.1-201ENST00000622380 412 ntBASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB9Q9Y5E1 SAGE4P-201ENST00000442271 3381 ntBASIC6.21□□□□□ -1.41
PCDHB9Q9Y5E1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 280.7 ms