Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CACYBPP1-201ENST00000438592 684 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RPL23AP16-201ENST00000441715 421 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 CEACAMP9-201ENST00000442990 513 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 MTCO1P27-201ENST00000448269 226 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 TRGVB-201ENST00000453257 471 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC099563.1-201ENST00000456086 418 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC063943.1-201ENST00000465434 453 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RPL7P19-201ENST00000469948 618 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC083798.1-201ENST00000472671 131 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC106872.3-201ENST00000495104 446 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 RN7SKP13-201ENST00000515933 244 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 Y_RNA.672-201ENST00000516289 104 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RNU6-445P-201ENST00000516949 107 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 SNORA48.10-201ENST00000516965 160 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 HMGB1P23-201ENST00000518743 568 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.28□□□□□ -1.56
EPHB3P54753 PHBP17-201ENST00000528576 541 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 HIGD1AP5-201ENST00000529959 259 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC063949.1-201ENST00000552900 865 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AL355836.1-201ENST00000555951 870 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 MIR4270-201ENST00000581799 70 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.28□□□□□ -1.56
EPHB3P54753 CKS1BP3-201ENST00000600888 237 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AL133338.2-201ENST00000604292 736 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC113139.1-201ENST00000605049 239 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 BCRP9-201ENST00000605312 388 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC105429.2-201ENST00000610567 517 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 uc_338.5-201ENST00000611839 155 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC068722.2-201ENST00000618734 544 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AL713922.2-201ENST00000619384 716 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC005858.4-201ENST00000623191 700 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC134503.1-201ENST00000633048 54 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EPHB3P54753 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
EPHB3P54753 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.28□□□□□ -1.56
EPHB3P54753 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
EPHB3P54753 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
EPHB3P54753 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 AL031595.2-201ENST00000624215 19071 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC099654.2-201ENST00000433031 1980 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC092162.3-201ENST00000624511 1624 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 OR11H4-201ENST00000315409 1082 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
EPHB3P54753 RNU6-254P-201ENST00000363377 107 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 Y_RNA.474-201ENST00000384341 102 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 RNU6-907P-201ENST00000390924 102 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 SNORA77-201ENST00000408716 125 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SNRPFP1-201ENST00000414761 252 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 MTCO2P5-201ENST00000422621 426 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 COX6CP13-201ENST00000428703 226 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC022022.1-201ENST00000430304 178 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 GPM6BP2-201ENST00000432046 144 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 AP000936.3-201ENST00000438127 255 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 MTND6P18-201ENST00000439477 513 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 UBE2V1P5-201ENST00000440070 405 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 CBX1P1-201ENST00000440184 427 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 CBWD4P-201ENST00000445695 655 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 GPM6BP1-201ENST00000446387 144 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 MEMO1P3-201ENST00000459811 302 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC130509.1-201ENST00000464158 433 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 RPS27P23-201ENST00000487608 251 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 RPS15AP36-201ENST00000492022 382 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms