Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco4Q9JIS3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco4Q9JIS3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.3□□□□□ -0.28
Smco4Q9JIS3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smco4Q9JIS3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms