Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC022819.1-201ENST00000563495 3910 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CLCA3P-203ENST00000490028 2781 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 MTND4P14-201ENST00000435799 1354 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 Y_RNA.28-201ENST00000362554 111 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RNA5SP188-201ENST00000362916 129 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RNA5SP433-201ENST00000364491 114 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 U3.12-201ENST00000364498 214 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RNA5SP485-201ENST00000365053 119 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 Y_RNA.452-201ENST00000384202 108 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 MIR137-201ENST00000385223 102 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 MTCYBP4-201ENST00000401524 249 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 SNORA11B-201ENST00000408175 129 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RN7SKP58-201ENST00000411010 305 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RN7SKP296-201ENST00000411185 341 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC009310.1-201ENST00000414414 451 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 METTL15P3-201ENST00000415522 1221 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC012065.2-201ENST00000421295 375 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC096632.1-201ENST00000427395 310 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC003989.1-201ENST00000434569 565 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 PPIAP13-201ENST00000434706 478 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 PMS2P9-201ENST00000441237 515 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC055855.1-201ENST00000489563 579 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC093303.1-201ENST00000514549 295 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-864P-201ENST00000516256 108 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 LSM6P2-201ENST00000552208 177 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC110588.1-201ENST00000559699 137 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC091133.5-201ENST00000603088 301 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 CTHRC1P1-201ENST00000605383 469 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC244517.12-201ENST00000623581 663 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AL354702.2-202ENST00000641481 890 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 AL596244.1-201ENST00000567068 3779 ntBASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB9Q9Y5E1 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 MAPK10-270ENST00000641102 3538 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 NCOA4P3-201ENST00000513203 1877 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-28P-201ENST00000362378 107 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 SNORA38B-201ENST00000363524 131 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 Y_RNA.187-201ENST00000363918 113 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 Y_RNA.373-201ENST00000365600 103 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-1013P-201ENST00000384180 107 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 MIR568-201ENST00000385036 95 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 MIR640-201ENST00000385086 96 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-308P-201ENST00000390957 107 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 PRELID1P1-201ENST00000403549 660 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RNA5SP345-201ENST00000410646 108 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 OR4K11P-201ENST00000431829 904 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 AL137792.2-201ENST00000443484 235 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 RPL32P28-201ENST00000443577 397 ntBASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB9Q9Y5E1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms