Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 RN7SL270P-201ENST00000579643 281 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC010680.4-201ENST00000605334 543 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 MIR6721-201ENST00000617181 87 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AL354718.1-201ENST00000619764 589 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 uc_338.22-201ENST00000622722 187 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC022400.9-201ENST00000623633 273 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 MAPK10-365ENST00000641902 3825 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC107081.3-201ENST00000612715 2034 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 AC011493.1-201ENST00000596753 1632 ntBASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB9Q9Y5E1 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 MAPK10-383ENST00000642032 3390 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC020658.2-201ENST00000559030 4020 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC004972.1-201ENST00000623934 2209 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC067945.1-201ENST00000342609 618 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RNA5SP321-201ENST00000362722 111 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-522P-201ENST00000364497 107 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-1318P-201ENST00000365389 103 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-38P-201ENST00000384085 107 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AMYP1-201ENST00000440059 1023 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC005297.2-201ENST00000450430 606 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RNU6-333P-201ENST00000459117 107 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 RN7SL413P-201ENST00000482700 297 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC004062.1-201ENST00000509926 645 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AL390198.2-201ENST00000510553 222 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC021146.1-201ENST00000511202 716 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 COPS8P3-201ENST00000526024 482 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 COX6CP5-201ENST00000527162 228 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AP003497.1-201ENST00000528472 562 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 PCNAP4-201ENST00000532690 730 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 MIR3149-201ENST00000584629 83 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 GLUD1P4-201ENST00000590914 418 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 CDC27P2-201ENST00000425026 1922 ntBASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB9Q9Y5E1 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms