Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAP47Q5SQN1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AC020907.5-201ENST00000624372 1936 ntBASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 KRT18P16-201ENST00000510337 1294 ntBASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AC010331.1-201ENST00000611423 582 ntBASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNAP47Q5SQN1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 AC073314.1-201ENST00000568729 2216 ntBASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 AC012306.2-201ENST00000609350 630 ntBASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 BX119927.1-201ENST00000636596 1552 ntBASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAP47Q5SQN1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SNAP47Q5SQN1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 RCN1P1-201ENST00000400413 996 ntBASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms