Protein–RNA interactions for Protein: S4R1M6

Gm27027, Predicted gene, 27027 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm27027S4R1M6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm27027S4R1M6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gm27027S4R1M6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gm27027S4R1M6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm27027S4R1M6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm27027S4R1M6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm27027S4R1M6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm27027S4R1M6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm27027S4R1M6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm27027S4R1M6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm27027S4R1M6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm27027S4R1M6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm27027S4R1M6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm27027S4R1M6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm27027S4R1M6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm27027S4R1M6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm27027S4R1M6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm27027S4R1M6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm27027S4R1M6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm27027S4R1M6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Gm27027S4R1M6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm27027S4R1M6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm27027S4R1M6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm27027S4R1M6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm27027S4R1M6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm27027S4R1M6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm27027S4R1M6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm27027S4R1M6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm27027S4R1M6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm27027S4R1M6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm27027S4R1M6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm27027S4R1M6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm27027S4R1M6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm27027S4R1M6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Gm27027S4R1M6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm27027S4R1M6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm27027S4R1M6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm27027S4R1M6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm27027S4R1M6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm27027S4R1M6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm27027S4R1M6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm27027S4R1M6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm27027S4R1M6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm27027S4R1M6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm27027S4R1M6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms