Protein–RNA interactions for Protein: Q9Z2V9

Ccni, Cyclin-I, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcniQ9Z2V9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CcniQ9Z2V9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CcniQ9Z2V9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CcniQ9Z2V9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CcniQ9Z2V9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.2■□□□□ 0.98
CcniQ9Z2V9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CcniQ9Z2V9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcniQ9Z2V9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcniQ9Z2V9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.19■□□□□ 0.98
CcniQ9Z2V9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcniQ9Z2V9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcniQ9Z2V9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.19■□□□□ 0.98
CcniQ9Z2V9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.18■□□□□ 0.98
CcniQ9Z2V9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcniQ9Z2V9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcniQ9Z2V9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcniQ9Z2V9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcniQ9Z2V9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CcniQ9Z2V9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CcniQ9Z2V9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CcniQ9Z2V9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcniQ9Z2V9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcniQ9Z2V9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcniQ9Z2V9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcniQ9Z2V9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcniQ9Z2V9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcniQ9Z2V9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CcniQ9Z2V9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CcniQ9Z2V9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CcniQ9Z2V9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CcniQ9Z2V9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcniQ9Z2V9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcniQ9Z2V9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcniQ9Z2V9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CcniQ9Z2V9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcniQ9Z2V9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CcniQ9Z2V9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcniQ9Z2V9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcniQ9Z2V9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CcniQ9Z2V9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CcniQ9Z2V9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CcniQ9Z2V9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CcniQ9Z2V9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcniQ9Z2V9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CcniQ9Z2V9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcniQ9Z2V9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcniQ9Z2V9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.09■□□□□ 0.97
CcniQ9Z2V9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CcniQ9Z2V9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CcniQ9Z2V9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.07■□□□□ 0.96
CcniQ9Z2V9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcniQ9Z2V9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcniQ9Z2V9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CcniQ9Z2V9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcniQ9Z2V9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcniQ9Z2V9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcniQ9Z2V9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.05■□□□□ 0.96
CcniQ9Z2V9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CcniQ9Z2V9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CcniQ9Z2V9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcniQ9Z2V9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CcniQ9Z2V9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.03■□□□□ 0.96
CcniQ9Z2V9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CcniQ9Z2V9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcniQ9Z2V9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CcniQ9Z2V9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CcniQ9Z2V9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CcniQ9Z2V9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcniQ9Z2V9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcniQ9Z2V9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcniQ9Z2V9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcniQ9Z2V9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcniQ9Z2V9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcniQ9Z2V9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CcniQ9Z2V9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CcniQ9Z2V9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CcniQ9Z2V9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CcniQ9Z2V9 Gm9397-201ENSMUST00000200125 605 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms