Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.4■■□□□ 1.02
RlimQ9WTV7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RlimQ9WTV7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RlimQ9WTV7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RlimQ9WTV7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RlimQ9WTV7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.38■■□□□ 1.01
RlimQ9WTV7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RlimQ9WTV7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RlimQ9WTV7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RlimQ9WTV7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RlimQ9WTV7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RlimQ9WTV7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RlimQ9WTV7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RlimQ9WTV7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RlimQ9WTV7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RlimQ9WTV7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RlimQ9WTV7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RlimQ9WTV7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.35■■□□□ 1.01
RlimQ9WTV7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RlimQ9WTV7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RlimQ9WTV7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RlimQ9WTV7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RlimQ9WTV7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.34■■□□□ 1.01
RlimQ9WTV7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RlimQ9WTV7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RlimQ9WTV7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RlimQ9WTV7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.32■■□□□ 1
RlimQ9WTV7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.32■■□□□ 1
RlimQ9WTV7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.31■■□□□ 1
RlimQ9WTV7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RlimQ9WTV7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RlimQ9WTV7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.29■■□□□ 1
RlimQ9WTV7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.29■■□□□ 1
RlimQ9WTV7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RlimQ9WTV7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RlimQ9WTV7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.28■■□□□ 1
RlimQ9WTV7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RlimQ9WTV7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RlimQ9WTV7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.28■■□□□ 1
RlimQ9WTV7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RlimQ9WTV7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RlimQ9WTV7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RlimQ9WTV7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.27■■□□□ 1
RlimQ9WTV7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RlimQ9WTV7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RlimQ9WTV7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RlimQ9WTV7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RlimQ9WTV7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RlimQ9WTV7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RlimQ9WTV7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RlimQ9WTV7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RlimQ9WTV7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RlimQ9WTV7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RlimQ9WTV7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RlimQ9WTV7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RlimQ9WTV7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RlimQ9WTV7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.24■□□□□ 0.99
RlimQ9WTV7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RlimQ9WTV7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RlimQ9WTV7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RlimQ9WTV7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RlimQ9WTV7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RlimQ9WTV7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RlimQ9WTV7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RlimQ9WTV7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.21■□□□□ 0.99
RlimQ9WTV7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.21■□□□□ 0.99
RlimQ9WTV7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.21■□□□□ 0.99
RlimQ9WTV7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RlimQ9WTV7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RlimQ9WTV7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RlimQ9WTV7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RlimQ9WTV7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RlimQ9WTV7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RlimQ9WTV7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RlimQ9WTV7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RlimQ9WTV7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RlimQ9WTV7 Particl-201ENSMUST00000205370 1560 ntBASIC21.16■□□□□ 0.98
RlimQ9WTV7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RlimQ9WTV7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RlimQ9WTV7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RlimQ9WTV7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RlimQ9WTV7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RlimQ9WTV7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RlimQ9WTV7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RlimQ9WTV7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RlimQ9WTV7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RlimQ9WTV7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RlimQ9WTV7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RlimQ9WTV7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RlimQ9WTV7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RlimQ9WTV7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.13■□□□□ 0.97
RlimQ9WTV7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RlimQ9WTV7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RlimQ9WTV7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
RlimQ9WTV7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RlimQ9WTV7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RlimQ9WTV7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RlimQ9WTV7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RlimQ9WTV7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms