Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uchl1Q9R0P9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uchl1Q9R0P9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Uchl1Q9R0P9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uchl1Q9R0P9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Uchl1Q9R0P9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.75■□□□□ 0.91
Uchl1Q9R0P9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uchl1Q9R0P9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uchl1Q9R0P9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Uchl1Q9R0P9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl1Q9R0P9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Uchl1Q9R0P9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.72■□□□□ 0.91
Uchl1Q9R0P9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uchl1Q9R0P9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Uchl1Q9R0P9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl1Q9R0P9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl1Q9R0P9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Uchl1Q9R0P9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl1Q9R0P9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl1Q9R0P9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl1Q9R0P9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl1Q9R0P9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl1Q9R0P9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.67■□□□□ 0.9
Uchl1Q9R0P9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl1Q9R0P9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl1Q9R0P9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Uchl1Q9R0P9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl1Q9R0P9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Uchl1Q9R0P9 Gm8109-201ENSMUST00000194076 746 ntBASIC20.64■□□□□ 0.89
Uchl1Q9R0P9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl1Q9R0P9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl1Q9R0P9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl1Q9R0P9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.63■□□□□ 0.89
Uchl1Q9R0P9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl1Q9R0P9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl1Q9R0P9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl1Q9R0P9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uchl1Q9R0P9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uchl1Q9R0P9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Uchl1Q9R0P9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.6■□□□□ 0.89
Uchl1Q9R0P9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uchl1Q9R0P9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uchl1Q9R0P9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uchl1Q9R0P9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uchl1Q9R0P9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Uchl1Q9R0P9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Uchl1Q9R0P9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Uchl1Q9R0P9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Uchl1Q9R0P9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uchl1Q9R0P9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uchl1Q9R0P9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uchl1Q9R0P9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uchl1Q9R0P9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uchl1Q9R0P9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uchl1Q9R0P9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uchl1Q9R0P9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uchl1Q9R0P9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uchl1Q9R0P9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uchl1Q9R0P9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uchl1Q9R0P9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Uchl1Q9R0P9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uchl1Q9R0P9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Uchl1Q9R0P9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uchl1Q9R0P9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Uchl1Q9R0P9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Uchl1Q9R0P9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uchl1Q9R0P9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Uchl1Q9R0P9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl1Q9R0P9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl1Q9R0P9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl1Q9R0P9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl1Q9R0P9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Uchl1Q9R0P9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl1Q9R0P9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl1Q9R0P9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl1Q9R0P9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl1Q9R0P9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Uchl1Q9R0P9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl1Q9R0P9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.5■□□□□ 0.87
Uchl1Q9R0P9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms