Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcl1Q9JJT0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcl1Q9JJT0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcl1Q9JJT0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rcl1Q9JJT0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rcl1Q9JJT0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.64■□□□□ 0.73
Rcl1Q9JJT0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcl1Q9JJT0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcl1Q9JJT0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.63■□□□□ 0.73
Rcl1Q9JJT0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcl1Q9JJT0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.63■□□□□ 0.73
Rcl1Q9JJT0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rcl1Q9JJT0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rcl1Q9JJT0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rcl1Q9JJT0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcl1Q9JJT0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rcl1Q9JJT0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcl1Q9JJT0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcl1Q9JJT0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.6■□□□□ 0.73
Rcl1Q9JJT0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rcl1Q9JJT0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rcl1Q9JJT0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rcl1Q9JJT0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rcl1Q9JJT0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rcl1Q9JJT0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rcl1Q9JJT0 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.58■□□□□ 0.72
Rcl1Q9JJT0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rcl1Q9JJT0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rcl1Q9JJT0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rcl1Q9JJT0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rcl1Q9JJT0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rcl1Q9JJT0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rcl1Q9JJT0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rcl1Q9JJT0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rcl1Q9JJT0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rcl1Q9JJT0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rcl1Q9JJT0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rcl1Q9JJT0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rcl1Q9JJT0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rcl1Q9JJT0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rcl1Q9JJT0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rcl1Q9JJT0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rcl1Q9JJT0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rcl1Q9JJT0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rcl1Q9JJT0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rcl1Q9JJT0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.49■□□□□ 0.71
Rcl1Q9JJT0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rcl1Q9JJT0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rcl1Q9JJT0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.48■□□□□ 0.71
Rcl1Q9JJT0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rcl1Q9JJT0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.47■□□□□ 0.71
Rcl1Q9JJT0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rcl1Q9JJT0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.46■□□□□ 0.71
Rcl1Q9JJT0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rcl1Q9JJT0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rcl1Q9JJT0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rcl1Q9JJT0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rcl1Q9JJT0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rcl1Q9JJT0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rcl1Q9JJT0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rcl1Q9JJT0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rcl1Q9JJT0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rcl1Q9JJT0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rcl1Q9JJT0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rcl1Q9JJT0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.43■□□□□ 0.7
Rcl1Q9JJT0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rcl1Q9JJT0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rcl1Q9JJT0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rcl1Q9JJT0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rcl1Q9JJT0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms