Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ClpxQ9JHS4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ClpxQ9JHS4 Gm24970-201ENSMUST00000175582 82 ntBASIC21.25■□□□□ 0.99
ClpxQ9JHS4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClpxQ9JHS4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.24■□□□□ 0.99
ClpxQ9JHS4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.24■□□□□ 0.99
ClpxQ9JHS4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClpxQ9JHS4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClpxQ9JHS4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ClpxQ9JHS4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ClpxQ9JHS4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
ClpxQ9JHS4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ClpxQ9JHS4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ClpxQ9JHS4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.22■□□□□ 0.99
ClpxQ9JHS4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.22■□□□□ 0.99
ClpxQ9JHS4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ClpxQ9JHS4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClpxQ9JHS4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClpxQ9JHS4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClpxQ9JHS4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClpxQ9JHS4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClpxQ9JHS4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ClpxQ9JHS4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.2■□□□□ 0.98
ClpxQ9JHS4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClpxQ9JHS4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.19■□□□□ 0.98
ClpxQ9JHS4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClpxQ9JHS4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ClpxQ9JHS4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClpxQ9JHS4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClpxQ9JHS4 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.18■□□□□ 0.98
ClpxQ9JHS4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ClpxQ9JHS4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClpxQ9JHS4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClpxQ9JHS4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClpxQ9JHS4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClpxQ9JHS4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ClpxQ9JHS4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClpxQ9JHS4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClpxQ9JHS4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClpxQ9JHS4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.15■□□□□ 0.98
ClpxQ9JHS4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.15■□□□□ 0.98
ClpxQ9JHS4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.14■□□□□ 0.97
ClpxQ9JHS4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ClpxQ9JHS4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpxQ9JHS4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ClpxQ9JHS4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpxQ9JHS4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpxQ9JHS4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpxQ9JHS4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClpxQ9JHS4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClpxQ9JHS4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ClpxQ9JHS4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpxQ9JHS4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpxQ9JHS4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ClpxQ9JHS4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ClpxQ9JHS4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClpxQ9JHS4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClpxQ9JHS4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ClpxQ9JHS4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClpxQ9JHS4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClpxQ9JHS4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClpxQ9JHS4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClpxQ9JHS4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ClpxQ9JHS4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ClpxQ9JHS4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.07■□□□□ 0.96
ClpxQ9JHS4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClpxQ9JHS4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ClpxQ9JHS4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClpxQ9JHS4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ClpxQ9JHS4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.05■□□□□ 0.96
ClpxQ9JHS4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ClpxQ9JHS4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms