Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim16Q99PP9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim16Q99PP9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trim16Q99PP9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Trim16Q99PP9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
Trim16Q99PP9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trim16Q99PP9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim16Q99PP9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim16Q99PP9 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.76■■□□□ 1.23
Trim16Q99PP9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim16Q99PP9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trim16Q99PP9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim16Q99PP9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Trim16Q99PP9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.75■■□□□ 1.23
Trim16Q99PP9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim16Q99PP9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim16Q99PP9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Trim16Q99PP9 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.73■■□□□ 1.23
Trim16Q99PP9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Trim16Q99PP9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.72■■□□□ 1.23
Trim16Q99PP9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim16Q99PP9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim16Q99PP9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trim16Q99PP9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.7■■□□□ 1.23
Trim16Q99PP9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim16Q99PP9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.7■■□□□ 1.22
Trim16Q99PP9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim16Q99PP9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim16Q99PP9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Trim16Q99PP9 Nkain2-201ENSMUST00000092602 558 ntBASIC22.69■■□□□ 1.22
Trim16Q99PP9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim16Q99PP9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.68■■□□□ 1.22
Trim16Q99PP9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim16Q99PP9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim16Q99PP9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim16Q99PP9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim16Q99PP9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim16Q99PP9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim16Q99PP9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim16Q99PP9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim16Q99PP9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim16Q99PP9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim16Q99PP9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
Trim16Q99PP9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.65■■□□□ 1.22
Trim16Q99PP9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim16Q99PP9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trim16Q99PP9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim16Q99PP9 Gm6821-201ENSMUST00000107540 542 ntBASIC22.64■■□□□ 1.21
Trim16Q99PP9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
Trim16Q99PP9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Trim16Q99PP9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim16Q99PP9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trim16Q99PP9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim16Q99PP9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim16Q99PP9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim16Q99PP9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Trim16Q99PP9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim16Q99PP9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.61■■□□□ 1.21
Trim16Q99PP9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.61■■□□□ 1.21
Trim16Q99PP9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim16Q99PP9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim16Q99PP9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim16Q99PP9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.6■■□□□ 1.21
Trim16Q99PP9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.6■■□□□ 1.21
Trim16Q99PP9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim16Q99PP9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Trim16Q99PP9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim16Q99PP9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim16Q99PP9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim16Q99PP9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim16Q99PP9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim16Q99PP9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Trim16Q99PP9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim16Q99PP9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim16Q99PP9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim16Q99PP9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim16Q99PP9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim16Q99PP9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trim16Q99PP9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim16Q99PP9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim16Q99PP9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim16Q99PP9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim16Q99PP9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.53■■□□□ 1.2
Trim16Q99PP9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim16Q99PP9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim16Q99PP9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim16Q99PP9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim16Q99PP9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.52■■□□□ 1.2
Trim16Q99PP9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim16Q99PP9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.52■■□□□ 1.19
Trim16Q99PP9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Trim16Q99PP9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.5■■□□□ 1.19
Trim16Q99PP9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim16Q99PP9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms