Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx41Q91VN6 Gm30023-201ENSMUST00000197970 889 ntBASIC26.99■■□□□ 1.91
Ddx41Q91VN6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.98■■□□□ 1.91
Ddx41Q91VN6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Ddx41Q91VN6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx41Q91VN6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx41Q91VN6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx41Q91VN6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ddx41Q91VN6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx41Q91VN6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx41Q91VN6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx41Q91VN6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx41Q91VN6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx41Q91VN6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx41Q91VN6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx41Q91VN6 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.93■■□□□ 1.9
Ddx41Q91VN6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx41Q91VN6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx41Q91VN6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx41Q91VN6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx41Q91VN6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx41Q91VN6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Ddx41Q91VN6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx41Q91VN6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx41Q91VN6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx41Q91VN6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx41Q91VN6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx41Q91VN6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx41Q91VN6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ddx41Q91VN6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx41Q91VN6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx41Q91VN6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.86■■□□□ 1.89
Ddx41Q91VN6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.86■■□□□ 1.89
Ddx41Q91VN6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Ddx41Q91VN6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx41Q91VN6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.84■■□□□ 1.89
Ddx41Q91VN6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx41Q91VN6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx41Q91VN6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ddx41Q91VN6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx41Q91VN6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Ddx41Q91VN6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx41Q91VN6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx41Q91VN6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx41Q91VN6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.81■■□□□ 1.88
Ddx41Q91VN6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx41Q91VN6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx41Q91VN6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.79■■□□□ 1.88
Ddx41Q91VN6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.78■■□□□ 1.88
Ddx41Q91VN6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx41Q91VN6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx41Q91VN6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx41Q91VN6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Ddx41Q91VN6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.76■■□□□ 1.87
Ddx41Q91VN6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx41Q91VN6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx41Q91VN6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx41Q91VN6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.75■■□□□ 1.87
Ddx41Q91VN6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Ddx41Q91VN6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx41Q91VN6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx41Q91VN6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx41Q91VN6 Particl-201ENSMUST00000205370 1560 ntBASIC26.73■■□□□ 1.87
Ddx41Q91VN6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Ddx41Q91VN6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx41Q91VN6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Ddx41Q91VN6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.71■■□□□ 1.87
Ddx41Q91VN6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx41Q91VN6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx41Q91VN6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx41Q91VN6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx41Q91VN6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx41Q91VN6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Ddx41Q91VN6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx41Q91VN6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx41Q91VN6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx41Q91VN6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx41Q91VN6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx41Q91VN6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx41Q91VN6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Ddx41Q91VN6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx41Q91VN6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.64■■□□□ 1.86
Ddx41Q91VN6 Gm11175-201ENSMUST00000116172 543 ntBASIC26.64■■□□□ 1.86
Ddx41Q91VN6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ddx41Q91VN6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx41Q91VN6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx41Q91VN6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx41Q91VN6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Ddx41Q91VN6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx41Q91VN6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Ddx41Q91VN6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.61■■□□□ 1.85
Ddx41Q91VN6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Ddx41Q91VN6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx41Q91VN6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Ddx41Q91VN6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms