Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nkd2Q8VE28 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nkd2Q8VE28 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nkd2Q8VE28 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nkd2Q8VE28 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkd2Q8VE28 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nkd2Q8VE28 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nkd2Q8VE28 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.3■■□□□ 1
Nkd2Q8VE28 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkd2Q8VE28 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nkd2Q8VE28 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nkd2Q8VE28 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nkd2Q8VE28 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Nkd2Q8VE28 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Nkd2Q8VE28 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkd2Q8VE28 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkd2Q8VE28 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Nkd2Q8VE28 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■□□□□ 0.99
Nkd2Q8VE28 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkd2Q8VE28 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkd2Q8VE28 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkd2Q8VE28 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkd2Q8VE28 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nkd2Q8VE28 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkd2Q8VE28 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nkd2Q8VE28 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkd2Q8VE28 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkd2Q8VE28 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nkd2Q8VE28 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkd2Q8VE28 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nkd2Q8VE28 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkd2Q8VE28 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkd2Q8VE28 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.21■□□□□ 0.99
Nkd2Q8VE28 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Nkd2Q8VE28 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Nkd2Q8VE28 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.2■□□□□ 0.98
Nkd2Q8VE28 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.2■□□□□ 0.98
Nkd2Q8VE28 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkd2Q8VE28 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.2■□□□□ 0.98
Nkd2Q8VE28 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nkd2Q8VE28 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nkd2Q8VE28 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.18■□□□□ 0.98
Nkd2Q8VE28 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
Nkd2Q8VE28 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkd2Q8VE28 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkd2Q8VE28 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkd2Q8VE28 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.16■□□□□ 0.98
Nkd2Q8VE28 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nkd2Q8VE28 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkd2Q8VE28 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkd2Q8VE28 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Nkd2Q8VE28 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nkd2Q8VE28 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.13■□□□□ 0.97
Nkd2Q8VE28 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nkd2Q8VE28 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkd2Q8VE28 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nkd2Q8VE28 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkd2Q8VE28 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkd2Q8VE28 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.11■□□□□ 0.97
Nkd2Q8VE28 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkd2Q8VE28 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkd2Q8VE28 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Nkd2Q8VE28 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.1■□□□□ 0.97
Nkd2Q8VE28 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkd2Q8VE28 Mir6538-201ENSMUST00000183713 110 ntBASIC21.1■□□□□ 0.97
Nkd2Q8VE28 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nkd2Q8VE28 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkd2Q8VE28 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.09■□□□□ 0.97
Nkd2Q8VE28 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
Nkd2Q8VE28 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkd2Q8VE28 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.08■□□□□ 0.97
Nkd2Q8VE28 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkd2Q8VE28 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.07■□□□□ 0.96
Nkd2Q8VE28 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nkd2Q8VE28 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nkd2Q8VE28 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Nkd2Q8VE28 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.06■□□□□ 0.96
Nkd2Q8VE28 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nkd2Q8VE28 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkd2Q8VE28 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkd2Q8VE28 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Nkd2Q8VE28 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkd2Q8VE28 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkd2Q8VE28 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkd2Q8VE28 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkd2Q8VE28 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nkd2Q8VE28 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nkd2Q8VE28 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nkd2Q8VE28 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nkd2Q8VE28 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkd2Q8VE28 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.01■□□□□ 0.95
Nkd2Q8VE28 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nkd2Q8VE28 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkd2Q8VE28 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms