Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pspc1Q8R326 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pspc1Q8R326 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Pspc1Q8R326 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pspc1Q8R326 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pspc1Q8R326 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Pspc1Q8R326 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Pspc1Q8R326 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.37■■□□□ 1.97
Pspc1Q8R326 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pspc1Q8R326 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pspc1Q8R326 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Pspc1Q8R326 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pspc1Q8R326 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Gm11175-201ENSMUST00000116172 543 ntBASIC27.33■■□□□ 1.97
Pspc1Q8R326 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
Pspc1Q8R326 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.32■■□□□ 1.96
Pspc1Q8R326 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pspc1Q8R326 Gm6311-201ENSMUST00000073790 878 ntBASIC27.32■■□□□ 1.96
Pspc1Q8R326 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pspc1Q8R326 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Pspc1Q8R326 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Pspc1Q8R326 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pspc1Q8R326 Mir6538-201ENSMUST00000183713 110 ntBASIC27.28■■□□□ 1.96
Pspc1Q8R326 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pspc1Q8R326 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pspc1Q8R326 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.26■■□□□ 1.95
Pspc1Q8R326 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Pspc1Q8R326 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pspc1Q8R326 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pspc1Q8R326 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pspc1Q8R326 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pspc1Q8R326 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Pspc1Q8R326 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.19■■□□□ 1.94
Pspc1Q8R326 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pspc1Q8R326 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pspc1Q8R326 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pspc1Q8R326 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pspc1Q8R326 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Gm37136-201ENSMUST00000194368 194 ntBASIC27.1■■□□□ 1.93
Pspc1Q8R326 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pspc1Q8R326 Gm4799-201ENSMUST00000095396 657 ntBASIC27.08■■□□□ 1.93
Pspc1Q8R326 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pspc1Q8R326 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Pspc1Q8R326 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pspc1Q8R326 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.04■■□□□ 1.92
Pspc1Q8R326 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pspc1Q8R326 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Pspc1Q8R326 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.01■■□□□ 1.91
Pspc1Q8R326 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pspc1Q8R326 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pspc1Q8R326 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms