Protein–RNA interactions for Protein: Q8R297

Vmn1r235, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r235Q8R297 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vmn1r235Q8R297 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vmn1r235Q8R297 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vmn1r235Q8R297 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vmn1r235Q8R297 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Vmn1r235Q8R297 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Vmn1r235Q8R297 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Vmn1r235Q8R297 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vmn1r235Q8R297 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.57■□□□□ 0.72
Vmn1r235Q8R297 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r235Q8R297 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r235Q8R297 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.55■□□□□ 0.72
Vmn1r235Q8R297 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r235Q8R297 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.54■□□□□ 0.72
Vmn1r235Q8R297 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r235Q8R297 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r235Q8R297 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r235Q8R297 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r235Q8R297 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r235Q8R297 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r235Q8R297 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r235Q8R297 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r235Q8R297 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r235Q8R297 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r235Q8R297 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r235Q8R297 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r235Q8R297 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r235Q8R297 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r235Q8R297 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vmn1r235Q8R297 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r235Q8R297 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r235Q8R297 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r235Q8R297 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vmn1r235Q8R297 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r235Q8R297 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r235Q8R297 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r235Q8R297 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.48■□□□□ 0.71
Vmn1r235Q8R297 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Vmn1r235Q8R297 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.48■□□□□ 0.71
Vmn1r235Q8R297 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r235Q8R297 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r235Q8R297 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r235Q8R297 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r235Q8R297 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r235Q8R297 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Vmn1r235Q8R297 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r235Q8R297 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r235Q8R297 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vmn1r235Q8R297 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r235Q8R297 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r235Q8R297 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r235Q8R297 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r235Q8R297 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r235Q8R297 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r235Q8R297 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r235Q8R297 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r235Q8R297 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r235Q8R297 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r235Q8R297 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r235Q8R297 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r235Q8R297 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vmn1r235Q8R297 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r235Q8R297 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r235Q8R297 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r235Q8R297 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Vmn1r235Q8R297 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.4■□□□□ 0.7
Vmn1r235Q8R297 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vmn1r235Q8R297 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r235Q8R297 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vmn1r235Q8R297 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r235Q8R297 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r235Q8R297 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r235Q8R297 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r235Q8R297 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vmn1r235Q8R297 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmn1r235Q8R297 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r235Q8R297 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r235Q8R297 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmn1r235Q8R297 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vmn1r235Q8R297 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r235Q8R297 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r235Q8R297 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r235Q8R297 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vmn1r235Q8R297 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r235Q8R297 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r235Q8R297 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r235Q8R297 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 179.5 ms