Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cmtm4Q8CJ61 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cmtm4Q8CJ61 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
Cmtm4Q8CJ61 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cmtm4Q8CJ61 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cmtm4Q8CJ61 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cmtm4Q8CJ61 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cmtm4Q8CJ61 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cmtm4Q8CJ61 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cmtm4Q8CJ61 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cmtm4Q8CJ61 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cmtm4Q8CJ61 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cmtm4Q8CJ61 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cmtm4Q8CJ61 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cmtm4Q8CJ61 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cmtm4Q8CJ61 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cmtm4Q8CJ61 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.18■□□□□ 0.82
Cmtm4Q8CJ61 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cmtm4Q8CJ61 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cmtm4Q8CJ61 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cmtm4Q8CJ61 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cmtm4Q8CJ61 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cmtm4Q8CJ61 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
Cmtm4Q8CJ61 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Gm24804-201ENSMUST00000174982 85 ntBASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cmtm4Q8CJ61 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cmtm4Q8CJ61 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cmtm4Q8CJ61 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cmtm4Q8CJ61 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Cmtm4Q8CJ61 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cmtm4Q8CJ61 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmtm4Q8CJ61 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cmtm4Q8CJ61 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cmtm4Q8CJ61 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cmtm4Q8CJ61 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cmtm4Q8CJ61 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cmtm4Q8CJ61 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cmtm4Q8CJ61 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cmtm4Q8CJ61 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.07■□□□□ 0.8
Cmtm4Q8CJ61 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cmtm4Q8CJ61 Peli2-204ENSMUST00000226513 1320 ntBASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cmtm4Q8CJ61 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cmtm4Q8CJ61 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cmtm4Q8CJ61 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cmtm4Q8CJ61 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms