Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
Smc4Q8CG47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc4Q8CG47 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc4Q8CG47 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc4Q8CG47 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Smc4Q8CG47 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc4Q8CG47 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc4Q8CG47 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc4Q8CG47 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc4Q8CG47 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Smc4Q8CG47 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Smc4Q8CG47 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Smc4Q8CG47 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Smc4Q8CG47 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Smc4Q8CG47 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.25■■■□□ 2.27
Smc4Q8CG47 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Smc4Q8CG47 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.24■■■□□ 2.27
Smc4Q8CG47 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Smc4Q8CG47 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Smc4Q8CG47 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Smc4Q8CG47 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.22■■■□□ 2.27
Smc4Q8CG47 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Smc4Q8CG47 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.22■■■□□ 2.27
Smc4Q8CG47 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Smc4Q8CG47 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.21■■■□□ 2.27
Smc4Q8CG47 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Smc4Q8CG47 Amer2-203ENSMUST00000225247 2662 ntBASIC29.2■■■□□ 2.26
Smc4Q8CG47 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Smc4Q8CG47 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
Smc4Q8CG47 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Smc4Q8CG47 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.17■■■□□ 2.26
Smc4Q8CG47 Gm37136-201ENSMUST00000194368 194 ntBASIC29.17■■■□□ 2.26
Smc4Q8CG47 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Smc4Q8CG47 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Smc4Q8CG47 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.17■■■□□ 2.26
Smc4Q8CG47 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Smc4Q8CG47 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Smc4Q8CG47 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.16■■■□□ 2.26
Smc4Q8CG47 Gm6311-201ENSMUST00000073790 878 ntBASIC29.16■■■□□ 2.26
Smc4Q8CG47 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Smc4Q8CG47 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Smc4Q8CG47 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Smc4Q8CG47 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Smc4Q8CG47 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Smc4Q8CG47 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Smc4Q8CG47 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Smc4Q8CG47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
Smc4Q8CG47 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Smc4Q8CG47 Gm4799-201ENSMUST00000095396 657 ntBASIC29.1■■■□□ 2.25
Smc4Q8CG47 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Smc4Q8CG47 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Smc4Q8CG47 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Smc4Q8CG47 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Smc4Q8CG47 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Smc4Q8CG47 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Smc4Q8CG47 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Smc4Q8CG47 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.07■■■□□ 2.24
Smc4Q8CG47 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smc4Q8CG47 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smc4Q8CG47 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.05■■■□□ 2.24
Smc4Q8CG47 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Smc4Q8CG47 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
Smc4Q8CG47 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.02■■■□□ 2.24
Smc4Q8CG47 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Smc4Q8CG47 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.01■■■□□ 2.23
Smc4Q8CG47 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc4Q8CG47 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Smc4Q8CG47 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29■■■□□ 2.23
Smc4Q8CG47 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
Smc4Q8CG47 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Smc4Q8CG47 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.99■■■□□ 2.23
Smc4Q8CG47 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.99■■■□□ 2.23
Smc4Q8CG47 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.98■■■□□ 2.23
Smc4Q8CG47 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.98■■■□□ 2.23
Smc4Q8CG47 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.97■■■□□ 2.23
Smc4Q8CG47 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Smc4Q8CG47 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Smc4Q8CG47 Mir3960-201ENSMUST00000198213 73 ntBASIC28.96■■■□□ 2.23
Smc4Q8CG47 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Smc4Q8CG47 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Smc4Q8CG47 Mir6538-201ENSMUST00000183713 110 ntBASIC28.95■■■□□ 2.22
Smc4Q8CG47 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Smc4Q8CG47 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Smc4Q8CG47 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Smc4Q8CG47 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.94■■■□□ 2.22
Smc4Q8CG47 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Smc4Q8CG47 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.92■■■□□ 2.22
Smc4Q8CG47 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.91■■■□□ 2.22
Smc4Q8CG47 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.91■■■□□ 2.22
Smc4Q8CG47 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Smc4Q8CG47 Gm11175-201ENSMUST00000116172 543 ntBASIC28.91■■■□□ 2.22
Smc4Q8CG47 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Smc4Q8CG47 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Smc4Q8CG47 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.89■■■□□ 2.22
Smc4Q8CG47 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 255.7 ms