Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Zswim3Q8CFL8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.53■■□□□ 1.84
Zswim3Q8CFL8 Gm45364-201ENSMUST00000210883 159 ntBASIC26.53■■□□□ 1.84
Zswim3Q8CFL8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Zswim3Q8CFL8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Zswim3Q8CFL8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Zswim3Q8CFL8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Zswim3Q8CFL8 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.51■■□□□ 1.83
Zswim3Q8CFL8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Zswim3Q8CFL8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Zswim3Q8CFL8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Zswim3Q8CFL8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Zswim3Q8CFL8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Zswim3Q8CFL8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.49■■□□□ 1.83
Zswim3Q8CFL8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zswim3Q8CFL8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Zswim3Q8CFL8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Zswim3Q8CFL8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Zswim3Q8CFL8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Zswim3Q8CFL8 Gm14523-201ENSMUST00000117260 558 ntBASIC26.46■■□□□ 1.83
Zswim3Q8CFL8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Zswim3Q8CFL8 Gm5812-201ENSMUST00000061073 957 ntBASIC26.45■■□□□ 1.82
Zswim3Q8CFL8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Zswim3Q8CFL8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Zswim3Q8CFL8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Zswim3Q8CFL8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Zswim3Q8CFL8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.43■■□□□ 1.82
Zswim3Q8CFL8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Zswim3Q8CFL8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Zswim3Q8CFL8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Zswim3Q8CFL8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Zswim3Q8CFL8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zswim3Q8CFL8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zswim3Q8CFL8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.4■■□□□ 1.82
Zswim3Q8CFL8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Zswim3Q8CFL8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Zswim3Q8CFL8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Zswim3Q8CFL8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Zswim3Q8CFL8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Zswim3Q8CFL8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Zswim3Q8CFL8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Zswim3Q8CFL8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.35■■□□□ 1.81
Zswim3Q8CFL8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Zswim3Q8CFL8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Zswim3Q8CFL8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Zswim3Q8CFL8 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.33■■□□□ 1.81
Zswim3Q8CFL8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.33■■□□□ 1.81
Zswim3Q8CFL8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Zswim3Q8CFL8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Zswim3Q8CFL8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Zswim3Q8CFL8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Zswim3Q8CFL8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Zswim3Q8CFL8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.31■■□□□ 1.8
Zswim3Q8CFL8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Zswim3Q8CFL8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Zswim3Q8CFL8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Zswim3Q8CFL8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Zswim3Q8CFL8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Zswim3Q8CFL8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Zswim3Q8CFL8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Zswim3Q8CFL8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Zswim3Q8CFL8 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.29■■□□□ 1.8
Zswim3Q8CFL8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.28■■□□□ 1.8
Zswim3Q8CFL8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Zswim3Q8CFL8 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.27■■□□□ 1.8
Zswim3Q8CFL8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Zswim3Q8CFL8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Zswim3Q8CFL8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.26■■□□□ 1.79
Zswim3Q8CFL8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Zswim3Q8CFL8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
Zswim3Q8CFL8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Zswim3Q8CFL8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Zswim3Q8CFL8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Zswim3Q8CFL8 Gm37136-201ENSMUST00000194368 194 ntBASIC26.25■■□□□ 1.79
Zswim3Q8CFL8 Gm5921-201ENSMUST00000075898 882 ntBASIC26.25■■□□□ 1.79
Zswim3Q8CFL8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Zswim3Q8CFL8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Zswim3Q8CFL8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Zswim3Q8CFL8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.22■■□□□ 1.79
Zswim3Q8CFL8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Zswim3Q8CFL8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Zswim3Q8CFL8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.21■■□□□ 1.79
Zswim3Q8CFL8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Zswim3Q8CFL8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Zswim3Q8CFL8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Zswim3Q8CFL8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Zswim3Q8CFL8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Zswim3Q8CFL8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Zswim3Q8CFL8 Gm10420-201ENSMUST00000121713 882 ntBASIC26.18■■□□□ 1.78
Zswim3Q8CFL8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.18■■□□□ 1.78
Zswim3Q8CFL8 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.18■■□□□ 1.78
Zswim3Q8CFL8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.17■■□□□ 1.78
Zswim3Q8CFL8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Zswim3Q8CFL8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.16■■□□□ 1.78
Zswim3Q8CFL8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms