Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
A730049H05RikQ8C940 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
A730049H05RikQ8C940 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.27■■□□□ 1
A730049H05RikQ8C940 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
A730049H05RikQ8C940 Gm30023-201ENSMUST00000197970 889 ntBASIC21.27■■□□□ 1
A730049H05RikQ8C940 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
A730049H05RikQ8C940 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A730049H05RikQ8C940 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
A730049H05RikQ8C940 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.26■□□□□ 0.99
A730049H05RikQ8C940 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
A730049H05RikQ8C940 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A730049H05RikQ8C940 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A730049H05RikQ8C940 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A730049H05RikQ8C940 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A730049H05RikQ8C940 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A730049H05RikQ8C940 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.23■□□□□ 0.99
A730049H05RikQ8C940 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A730049H05RikQ8C940 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A730049H05RikQ8C940 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A730049H05RikQ8C940 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
A730049H05RikQ8C940 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
A730049H05RikQ8C940 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
A730049H05RikQ8C940 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
A730049H05RikQ8C940 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A730049H05RikQ8C940 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A730049H05RikQ8C940 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
A730049H05RikQ8C940 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
A730049H05RikQ8C940 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
A730049H05RikQ8C940 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
A730049H05RikQ8C940 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
A730049H05RikQ8C940 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
A730049H05RikQ8C940 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
A730049H05RikQ8C940 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
A730049H05RikQ8C940 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
A730049H05RikQ8C940 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
A730049H05RikQ8C940 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
A730049H05RikQ8C940 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
A730049H05RikQ8C940 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
A730049H05RikQ8C940 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
A730049H05RikQ8C940 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
A730049H05RikQ8C940 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
A730049H05RikQ8C940 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
A730049H05RikQ8C940 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
A730049H05RikQ8C940 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
A730049H05RikQ8C940 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
A730049H05RikQ8C940 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
A730049H05RikQ8C940 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.16■□□□□ 0.98
A730049H05RikQ8C940 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
A730049H05RikQ8C940 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
A730049H05RikQ8C940 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
A730049H05RikQ8C940 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
A730049H05RikQ8C940 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
A730049H05RikQ8C940 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
A730049H05RikQ8C940 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
A730049H05RikQ8C940 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
A730049H05RikQ8C940 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
A730049H05RikQ8C940 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
A730049H05RikQ8C940 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.13■□□□□ 0.97
A730049H05RikQ8C940 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.13■□□□□ 0.97
A730049H05RikQ8C940 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
A730049H05RikQ8C940 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
A730049H05RikQ8C940 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
A730049H05RikQ8C940 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
A730049H05RikQ8C940 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.11■□□□□ 0.97
A730049H05RikQ8C940 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
A730049H05RikQ8C940 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
A730049H05RikQ8C940 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
A730049H05RikQ8C940 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
A730049H05RikQ8C940 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
A730049H05RikQ8C940 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
A730049H05RikQ8C940 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
A730049H05RikQ8C940 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
A730049H05RikQ8C940 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.08■□□□□ 0.97
A730049H05RikQ8C940 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
A730049H05RikQ8C940 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
A730049H05RikQ8C940 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
A730049H05RikQ8C940 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
A730049H05RikQ8C940 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.07■□□□□ 0.96
A730049H05RikQ8C940 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
A730049H05RikQ8C940 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
A730049H05RikQ8C940 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
A730049H05RikQ8C940 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
A730049H05RikQ8C940 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
A730049H05RikQ8C940 Particl-201ENSMUST00000205370 1560 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms