Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Particl-201ENSMUST00000205370 1560 ntBASIC26.55■■□□□ 1.84
Smchd1Q6P5D8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.55■■□□□ 1.84
Smchd1Q6P5D8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Smchd1Q6P5D8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.53■■□□□ 1.84
Smchd1Q6P5D8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smchd1Q6P5D8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Smchd1Q6P5D8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Smchd1Q6P5D8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
Smchd1Q6P5D8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.51■■□□□ 1.83
Smchd1Q6P5D8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smchd1Q6P5D8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Smchd1Q6P5D8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smchd1Q6P5D8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smchd1Q6P5D8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smchd1Q6P5D8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smchd1Q6P5D8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Smchd1Q6P5D8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.49■■□□□ 1.83
Smchd1Q6P5D8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
Smchd1Q6P5D8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smchd1Q6P5D8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smchd1Q6P5D8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smchd1Q6P5D8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.46■■□□□ 1.83
Smchd1Q6P5D8 Gm11175-201ENSMUST00000116172 543 ntBASIC26.45■■□□□ 1.82
Smchd1Q6P5D8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.43■■□□□ 1.82
Smchd1Q6P5D8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smchd1Q6P5D8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smchd1Q6P5D8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Smchd1Q6P5D8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Smchd1Q6P5D8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smchd1Q6P5D8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smchd1Q6P5D8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smchd1Q6P5D8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Smchd1Q6P5D8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.38■■□□□ 1.81
Smchd1Q6P5D8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smchd1Q6P5D8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.38■■□□□ 1.81
Smchd1Q6P5D8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smchd1Q6P5D8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smchd1Q6P5D8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Smchd1Q6P5D8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smchd1Q6P5D8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smchd1Q6P5D8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Smchd1Q6P5D8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.32■■□□□ 1.8
Smchd1Q6P5D8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.32■■□□□ 1.8
Smchd1Q6P5D8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Smchd1Q6P5D8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Smchd1Q6P5D8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
Smchd1Q6P5D8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Smchd1Q6P5D8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.3■■□□□ 1.8
Smchd1Q6P5D8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.3■■□□□ 1.8
Smchd1Q6P5D8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smchd1Q6P5D8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smchd1Q6P5D8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smchd1Q6P5D8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smchd1Q6P5D8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smchd1Q6P5D8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.27■■□□□ 1.8
Smchd1Q6P5D8 Gm6311-201ENSMUST00000073790 878 ntBASIC26.27■■□□□ 1.8
Smchd1Q6P5D8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.27■■□□□ 1.8
Smchd1Q6P5D8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smchd1Q6P5D8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Smchd1Q6P5D8 Gm37136-201ENSMUST00000194368 194 ntBASIC26.26■■□□□ 1.79
Smchd1Q6P5D8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smchd1Q6P5D8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Smchd1Q6P5D8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Smchd1Q6P5D8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smchd1Q6P5D8 Gm45364-201ENSMUST00000210883 159 ntBASIC26.25■■□□□ 1.79
Smchd1Q6P5D8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smchd1Q6P5D8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smchd1Q6P5D8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smchd1Q6P5D8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smchd1Q6P5D8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Smchd1Q6P5D8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smchd1Q6P5D8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smchd1Q6P5D8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smchd1Q6P5D8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smchd1Q6P5D8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smchd1Q6P5D8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Smchd1Q6P5D8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smchd1Q6P5D8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.15■■□□□ 1.78
Smchd1Q6P5D8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smchd1Q6P5D8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.14■■□□□ 1.78
Smchd1Q6P5D8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smchd1Q6P5D8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smchd1Q6P5D8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smchd1Q6P5D8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Smchd1Q6P5D8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smchd1Q6P5D8 Mir6538-201ENSMUST00000183713 110 ntBASIC26.12■■□□□ 1.77
Smchd1Q6P5D8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smchd1Q6P5D8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smchd1Q6P5D8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smchd1Q6P5D8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smchd1Q6P5D8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Smchd1Q6P5D8 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.1■■□□□ 1.77
Smchd1Q6P5D8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.1■■□□□ 1.77
Smchd1Q6P5D8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smchd1Q6P5D8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smchd1Q6P5D8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smchd1Q6P5D8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Smchd1Q6P5D8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Smchd1Q6P5D8 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.07■■□□□ 1.76
Smchd1Q6P5D8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms